Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p32350 Brassica napus
Aa31LG6G8320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1575 Anthoceros agrestis
Actinidia17754 Actinidia chinensis
Actinidia17755 Actinidia chinensis
Ah.02g115760 Amaranthus hybridus
AL1G48650 Arabidopsis lyrata
Aqoxy5G02015 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.15WA1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.29RT0M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3U6NKV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A75B0U Arachis hypogaea
AT1G34150 Arabidopsis thaliana
ATR0564G440 Amborella trichopoda
Atru.chr13.1965 Acer truncatum
AUR62022311 Chenopodium quinoa
AUR62034929 Chenopodium quinoa
BcaB07g33038 Brassica carinata
BcaC08g43808 Brassica carinata
BolC6t36321H Brassica oleracea
BraA09t38776Z Brassica rapa
C06p11890 Brassica napus
CAN.G564.32 Capsicum annuum
CANSAT25G2324 Cannabis sativa
CARHR033660 Cardamine hirsuta
CARHR033670 Cardamine hirsuta
Carub.0001s3222 Capsella rubella
Ca_10644_v3 Cicer arietinum L.
CBR_g31748 Chara braunii
Cc10_g06370 Coffea canephora
CDE09G0968 Ceratophyllum demersum
Cfa018255 Carpinus fangiana
Cfa024548 Carpinus fangiana
Ciclev10001190m.g Citrus clementina
CiPaw.15G011200 Carya illinoinensis
ClCG08G007170 Citrullus lanatus
COL.COLO4_13720 Corchorus olitorius
Cpa.g.sc26.127 Carica papaya
Cre02.g086050 Chlamydomonas reinhardtii
CsaV3_6G004840 Cucumis sativus L.
CSS0015534 Camellia sinensis var. sinensis
CSS0031675 Camellia sinensis var. sinensis
DCAR_013167 Daucus carota
Dinv41018 Davidia involucrata
Duzib093G0465 Durio zibethinus
ECA247G4107 Erigeron canadensis
EL10Ac1g01637 Beta vulgaris
Eucgr.F00074 Eucalyptus grandis
Eucgr.F02671 Eucalyptus grandis
Eucgr.I00104 Eucalyptus grandis
Eucgr.J00222 Eucalyptus grandis
Eucgr.L00427 Eucalyptus grandis
FAN15G2448 Fragaria x ananassa
FAN24G0542 Fragaria x ananassa
FvH4_2g12780 Fragaria vesca
Glyma.10G220000 Glycine max
Glyma.20G171700 Glycine max
Glyma.20G171733 Glycine max
Gohir.A02G061800 Gossypium hirsutum
Gohir.D02G067400 Gossypium hirsutum
Gorai.005G076300 Gossypium raimondii
GSVIVG01013676001 Vitis vinifera
HanXRQChr04g0115611 Helianthus annuus
Haze_17834 Corylus avellana
Haze_17840 Corylus avellana
Hma1.2p1_0358F.1_g134900 Hydrangea macrophylla
Hma1.2p1_0358F.1_g134910 Hydrangea macrophylla
HPP92_016851 Vanilla planifolia
HPP92_016852 Vanilla planifolia
HPP92_027830 Vanilla planifolia
HPP92_027831 Vanilla planifolia
Hund26667 Selenicereus undatus
Lalb_Chr02g0141641 Lupinus albus
Lalb_Chr02g0141651 Lupinus albus
Lj3A527T9 Lonicera japonica
Lj5g0012902 Lotus japonicus
Lj7C387T6 Lonicera japonica
Lsat_1_v5_gn_1_5920 Lactuca sativa
Lsat_1_v5_gn_1_5940 Lactuca sativa
Manes.02G186000 Manihot esculenta
Mapoly0139s0011 Marchantia polymorpha
MCO10G057 Micromonas commoda
MD05G1036800 Malus domestica
MD05G1036900 Malus domestica
Medtr1g097390 Medicago truncatula
MELO3C019957.2 Cucumis melo
Migut.N02937 Erythranthe guttata
MSTRG.22119 Avicennia marina
Nitab4.5_0000433g0050 Nicotiana tabacum
Nitab4.5_0001000g0130 Nicotiana tabacum
Nn5g28881 Nelumbo nucifera
Oeu022063.1 Olea europaea
Os03g0381100 Oryza sativa ssp. japonica
Peaxi162Scf00226g00219 Petunia axillaris
PGR042G2919 Punica granatum
PGSC0003DMG400031154 Solanum tuberosum
Phvul.007G085300 Phaseolus vulgaris
Potri.002G061650 Populus trichocarpa
Pp3c9_3740 Physcomitrium patens
PRCOL_00002466 Prasinoderma coloniale
Prupe.8G045000 Prunus persica
Psat4g128520 Pisum sativum
Psat6g189760 Pisum sativum
PSO170G2558 Papaver somniferum
PSO210G7095 Papaver somniferum
QL02p036335 Quercus lobata
RcHm_v2.0_Chr6g0273621 Rosa chinensis
Rhsim06G0093900 Rhododendron simsii
Sabra02G0049900 Salix brachista
SalBow6G4612 Salvia bowleyana
Sc13g0008190 Simmondsia chinensis
Sed0016594 Sechium edule
SEGI_11089 Sequoiadendron giganteum
SEGI_30885 Sequoiadendron giganteum
SEGI_37134 Sequoiadendron giganteum
SGA_v2.0_scaffold371G50147 Striga asiatica
SHI09122 Sapria himalayana
SHI09123 Sapria himalayana
SMO174G0185 Selaginella moellendorffii
Solyc04g072140.4 Solanum lycopersicum
Sopen04g028310 Solanum pennellii
Sp1g29390 Schrenkiella parvula
TAR625G0054 Trochodendron aralioides
THA.LOC104816107 Tarenaya hassleriana
Thecc.08G196200 Theobroma cacao
Thecc.09G171000 Theobroma cacao
Thecc.10G182000 Theobroma cacao
Thhalv10007608m.g Eutrema salsugineum
TPR.G23158 Trifolium pratense
TPR.G7160 Trifolium pratense
TWI74G0660 Tripterygium wilfordii
unitig_21.g20592 Utricularia gibba
unitig_21.g20593 Utricularia gibba
vmacro21200 Vaccinium macrocarpon
VMungo0720G1747 Vigna mungo
Zm00001eb018490 Zea mays

User provided reference genes

Program Settings