Gene: Nitab4.5_0001000g0130
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0001000g0130
- Transcript Identifier Nitab4.5_0001000g0130.1
- Gene Type Coding gene
- Location Nitab4.5_0001000 : 240054-247085 : negative
Gene Family Information
- ID HOM05D005655
- #Genes/#Species 136/99
- Phylogenetic origin
- ID ORTHO05D007386
- #Genes/#Species 131/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0001000g0130.1
- SR1-identifier Nta08g14170.1
Descriptions
- Description Pseudouridine synthase I, TruA, N-terminal, Pseudouridine synthase I, TruA, C-terminal, Pseudouridine synthase I, TruA, alpha/beta domain, Pseudouridine synthase I, TruA, Pseudouridine synthase, catalytic domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001522 | IEA | InterPro | pseudouridine synthesis | |
| GO:0009451 | IEA | InterPro | RNA modification |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0009982 | IEA | InterPro | pseudouridine synthase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001406 | Pseudouridine synthase I, TruA |
| IPR020103 | Pseudouridine synthase, catalytic domain superfamily |
| IPR020094 | Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal |
| IPR020097 | Pseudouridine synthase I, TruA, alpha/beta domain |
| IPR041707 | Pseudouridine synthase Pus3-like |
| IPR020095 | Pseudouridine synthase I, TruA, C-terminal |
| Mapman id | Description |
|---|---|
| 16.5.3.1 | RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA) |