Gene: Aa31LG6G8320

General Information

Structural Information

  • Species Aethionema arabicum
  • Gene Identifier Aa31LG6G8320
  • Transcript Identifier Aa31LG6G8320.mRNA1
  • Gene Type Coding gene
  • Location LG-6 : 4585921-4592258 : positive

Gene Family Information

  • ID HOM05D005655
  • #Genes/#Species 136/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Aa31LG6G8320.mRNA1
  • Alias Aa31LG6G8320
  • Alias Aa31LG6G8320-mRNA-1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification Os12g0270200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion Os12g0270200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020103 Pseudouridine synthase, catalytic domain superfamily
IPR032867 DYW domain
IPR020094 Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 Pseudouridine synthase I, TruA, C-terminal
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR041707 Pseudouridine synthase Pus3-like
IPR001406 Pseudouridine synthase I, TruA
IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain
Mapman id Description
16.5.3.1 RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA)