Gene: CDE09G0968

General Information

Structural Information

  • Species Ceratophyllum demersum
  • Gene Identifier CDE09G0968
  • Transcript Identifier CDE09G0968.1
  • Gene Type Coding gene
  • Location 7 : 7570706-7612118 : positive

Gene Family Information

  • ID HOM05D005655
  • #Genes/#Species 136/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name gene_prefix18072

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification
GO:0042147
IEA
InterProretrograde transport, endosome to Golgi

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030904
IEA
InterProretromer complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001406 Pseudouridine synthase I, TruA
IPR000979 Phosphodiesterase MJ0936/Vps29
IPR029052 Metallo-dependent phosphatase-like
IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain
IPR028661 Vacuolar protein sorting-associated protein 29
IPR020094 Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 Pseudouridine synthase I, TruA, C-terminal
IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type
IPR020103 Pseudouridine synthase, catalytic domain superfamily
Mapman id Description
16.5.3.1 RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA)
22.4.2.1.2 Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.Retromer complex.component VPS29