Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p18380 Brassica napus
Aa31LG5G8210 Aethionema arabicum
Actinidia08155 Actinidia chinensis
Ah.02g130030 Amaranthus hybridus
AL4G22490 Arabidopsis lyrata
Aqoxy3G01083 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0L0HR0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5FW2L6 Arachis hypogaea
AT2G27790 Arabidopsis thaliana
AT5G27300 Arabidopsis thaliana
ATR1091G072 Amborella trichopoda
Atru.chr11.2060 Acer truncatum
AUR62005408 Chenopodium quinoa
AUR62014068 Chenopodium quinoa
BcaB02g10116 Brassica carinata
BcaB05g23234 Brassica carinata
BcaB06g28170 Brassica carinata
BcaC02g10906 Brassica carinata
BolC4t23879H Brassica oleracea
BraA04t17683Z Brassica rapa
BraA07t29554Z Brassica rapa
C04p23810 Brassica napus
CAN.G21.11 Capsicum annuum
CANSAT56G2850 Cannabis sativa
CARHR120490 Cardamine hirsuta
Carub.0004s0855 Capsella rubella
Ca_05838_v3 Cicer arietinum L.
Ca_28318_v3 Cicer arietinum L.
CBR_g19306 Chara braunii
Cc08_g15830 Coffea canephora
CDE06G1284 Ceratophyllum demersum
Cfa009174 Carpinus fangiana
Ciclev10032655m.g Citrus clementina
CiPaw.05G185800 Carya illinoinensis
ClCG08G017930 Citrullus lanatus
COL.COLO4_24201 Corchorus olitorius
COL.COLO4_24203 Corchorus olitorius
Cpa.g.sc69.68 Carica papaya
CsaV3_2G024710 Cucumis sativus L.
CSS0021029 Camellia sinensis var. sinensis
CSS0030415 Camellia sinensis var. sinensis
DCAR_026533 Daucus carota
Dinv24830 Davidia involucrata
Duzib251G0376 Durio zibethinus
ECA233G2638 Erigeron canadensis
ECA233G5965 Erigeron canadensis
EL10Ac6g13701 Beta vulgaris
Eucgr.D00612 Eucalyptus grandis
Eucgr.K03598 Eucalyptus grandis
FAN11G0752 Fragaria x ananassa
FAN16G0047 Fragaria x ananassa
FAN21G3548 Fragaria x ananassa
FAN25G2737 Fragaria x ananassa
FvH4_3g23340 Fragaria vesca
Glyma.11G125900 Glycine max
Glyma.12G050500 Glycine max
Gohir.A01G162200 Gossypium hirsutum
Gohir.A07G086801 Gossypium hirsutum
Gohir.D01G149500 Gossypium hirsutum
Gohir.D05G347832 Gossypium hirsutum
Gohir.D07G091700 Gossypium hirsutum
Gohir.D08G021700 Gossypium hirsutum
Gorai.001G098200 Gossypium raimondii
Gorai.002G185600 Gossypium raimondii
Gorai.004G016800 Gossypium raimondii
Gorai.009G374800 Gossypium raimondii
GSVIVG01013774001 Vitis vinifera
HanXRQChr12g0371541 Helianthus annuus
Haze_12208 Corylus avellana
Hma1.2p1_0223F.1_g094390 Hydrangea macrophylla
Hma1.2p1_0587F.1_g184080 Hydrangea macrophylla
HPP92_004504 Vanilla planifolia
HPP92_004538 Vanilla planifolia
Hund18879 Selenicereus undatus
Hund25366 Selenicereus undatus
Lalb_Chr12g0210051 Lupinus albus
Lj1g0002439 Lotus japonicus
Lj3g0022996 Lotus japonicus
Lj6A807T86 Lonicera japonica
Lsat_1_v5_gn_8_155560 Lactuca sativa
Lsat_1_v5_gn_9_120260 Lactuca sativa
Manes.12G026800 Manihot esculenta
Mapoly0029s0094 Marchantia polymorpha
MBI02_g20871_MAGBIO Magnolia biondii
MBI02_g25373_MAGBIO Magnolia biondii
MBI02_g44783_MAGBIO Magnolia biondii
MBI10_g28000_MAGBIO Magnolia biondii
MBI14_g10639_MAGBIO Magnolia biondii
MBI19_g26621_MAGBIO Magnolia biondii
MBI19_g40647_MAGBIO Magnolia biondii
MD11G1211500 Malus domestica
Medtr5g077780 Medicago truncatula
MELO3C010671.2 Cucumis melo
Migut.E00177 Erythranthe guttata
MSTRG.2403 Avicennia marina
Nitab4.5_0000125g0200 Nicotiana tabacum
Nitab4.5_0006579g0040 Nicotiana tabacum
Nn2g14080 Nelumbo nucifera
Nn4g22723 Nelumbo nucifera
Oeu056410.1 Olea europaea
Os02g0105000 Oryza sativa ssp. japonica
Peaxi162Scf00105g01417 Petunia axillaris
PGR142G0158 Punica granatum
PGSC0003DMG400033619 Solanum tuberosum
Phvul.011G052800 Phaseolus vulgaris
Potri.006G221301 Populus trichocarpa
Potri.009G167600 Populus trichocarpa
Pp3c16_13430 Physcomitrium patens
Prupe.4G221000 Prunus persica
Psat2g045680 Pisum sativum
PSO017G5970 Papaver somniferum
PSO478G2901 Papaver somniferum
QL01p007518 Quercus lobata
QL03p059496 Quercus lobata
RcHm_v2.0_Chr5g0041131 Rosa chinensis
Rhsim12G0043700 Rhododendron simsii
Sabra09G0130200 Salix brachista
SalBow8G4058 Salvia bowleyana
Sc11g0001080 Simmondsia chinensis
Sed0009924 Sechium edule
SEGI_24248 Sequoiadendron giganteum
SGA_v2.0_scaffold57G20112 Striga asiatica
SGA_v2.0_scaffold74G24685 Striga asiatica
SHI17678 Sapria himalayana
SMO361G0752 Selaginella moellendorffii
Solyc08g067820.3 Solanum lycopersicum
Sopen08g021760 Solanum pennellii
Sp4g10620 Schrenkiella parvula
TAR374G1289 Trochodendron aralioides
Thecc.02G253500 Theobroma cacao
Thhalv10017205m.g Eutrema salsugineum
TPR.G23699 Trifolium pratense
TPR.G25316 Trifolium pratense
TWI18G1102 Tripterygium wilfordii
unitig_62.g23668 Utricularia gibba
vmacro01156 Vaccinium macrocarpon
VMungo1127G1231 Vigna mungo
Zm00001eb209860 Zea mays

User provided reference genes

Program Settings