Gene: Solyc08g067820.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g067820.3
  • Transcript Identifier Solyc08g067820.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 54957646-54961564 : positive

Gene Family Information

  • ID HOM05D005584
  • #Genes/#Species 138/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g067820.3.1
  • uniprot A0A3Q7HPI0
  • gene_id Solyc08g067820

Descriptions

  • Description RNA-binding protein 48 (AHRD V3.3 *** A0A2I4DDN3_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005654
IBA
GOA Databasenucleoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039599 RNA-binding protein 48
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR034264 RBM48, RNA recognition motif
Mapman id Description
16.2.4.4 RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.splicing factor (RBM48)