Gene: Sopen08g021760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g021760
  • Transcript Identifier Sopen08g021760.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 61055246-61059196 : positive

Gene Family Information

  • ID HOM05D005584
  • #Genes/#Species 138/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g021760.1

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 17 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein .
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR039599 RNA-binding protein 48
IPR035979 RNA-binding domain superfamily
IPR034264 RBM48, RNA recognition motif
Mapman id Description
16.2.4.4 RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.splicing factor (RBM48)