Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p11550 Brassica napus
Aa31LG3G10220 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis
Actinidia35283 Actinidia chinensis
AL8G29590 Arabidopsis lyrata
Aqoxy1G03881 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9SD0MH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B8LUK6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BTU26G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q8WXS4 Arachis hypogaea
AT5G54260 Arabidopsis thaliana
ATR0693G020 Amborella trichopoda
Atru.chr2.2912 Acer truncatum
Atru.chr2.2913 Acer truncatum
AUR62015595 Chenopodium quinoa
AUR62029306 Chenopodium quinoa
BcaB08g35781 Brassica carinata
BcaC04g20356 Brassica carinata
BolC9t57330H Brassica oleracea
BraA10t43250Z Brassica rapa
C09p44570 Brassica napus
CAN.G397.4 Capsicum annuum
CAN.G824.3 Capsicum annuum
CANSAT11G0579 Cannabis sativa
CARHR267540 Cardamine hirsuta
Carub.0008s1460 Capsella rubella
Ca_01800_v3 Cicer arietinum L.
Ca_01813_v3 Cicer arietinum L.
Ca_30473_v3 Cicer arietinum L.
CBR_g48040 Chara braunii
Cc06_g05450 Coffea canephora
Cc06_g05460 Coffea canephora
CDE12G0011 Ceratophyllum demersum
CDE12G0057 Ceratophyllum demersum
CDE12G0487 Ceratophyllum demersum
CDE12G0672 Ceratophyllum demersum
Cfa025591 Carpinus fangiana
Ciclev10007579m.g Citrus clementina
CiPaw.11G177000 Carya illinoinensis
ClCG11G018480 Citrullus lanatus
COL.COLO4_09485 Corchorus olitorius
Cpa.g.sc12.44 Carica papaya
Cre12.g556911 Chlamydomonas reinhardtii
CsaV3_3G044350 Cucumis sativus L.
CSS0003917 Camellia sinensis var. sinensis
DCAR_018424 Daucus carota
Dinv08347 Davidia involucrata
Duzib170G0704 Durio zibethinus
ECA240G2604 Erigeron canadensis
EL10Ac3g06279 Beta vulgaris
EL10Ac4g08052 Beta vulgaris
Eucgr.C01186 Eucalyptus grandis
Eucgr.F01076 Eucalyptus grandis
FAN11G3021 Fragaria x ananassa
FAN16G0276 Fragaria x ananassa
FAN21G3123 Fragaria x ananassa
FAN25G3415 Fragaria x ananassa
FvH4_3g21040 Fragaria vesca
Glyma.12G219100 Glycine max
Gohir.A04G025700 Gossypium hirsutum
Gohir.A04G026000 Gossypium hirsutum
Gohir.D01G056400 Gossypium hirsutum
Gohir.D05G362100 Gossypium hirsutum
Gorai.002G076500 Gossypium raimondii
Gorai.009G430700 Gossypium raimondii
GSVIVG01001483001 Vitis vinifera
GSVIVG01001488001 Vitis vinifera
GSVIVG01001498001 Vitis vinifera
GSVIVG01001519001 Vitis vinifera
GSVIVG01002726001 Vitis vinifera
GSVIVG01014441001 Vitis vinifera
HanXRQChr03g0077211 Helianthus annuus
Haze_09533 Corylus avellana
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla
HPP92_026534 Vanilla planifolia
HPP92_026561 Vanilla planifolia
Hund02186 Selenicereus undatus
Lalb_Chr25g0286791 Lupinus albus
Lj3g0015043 Lotus japonicus
Lj8C160T16 Lonicera japonica
Lsat_1_v5_gn_9_95600 Lactuca sativa
Manes.15G082900 Manihot esculenta
Mapoly0023s0117 Marchantia polymorpha
MBI09_g27609_MAGBIO Magnolia biondii
MBI15_g19746_MAGBIO Magnolia biondii
MCO13G379 Micromonas commoda
MD03G1218100 Malus domestica
MD11G1235900 Malus domestica
Medtr2g081100 Medicago truncatula
MELO3C018187.2 Cucumis melo
Migut.J00972 Erythranthe guttata
MSTRG.5819 Avicennia marina
Nitab4.5_0001969g0080 Nicotiana tabacum
Nitab4.5_0007366g0050 Nicotiana tabacum
Nitab4.5_0007366g0060 Nicotiana tabacum
Nn1g03887 Nelumbo nucifera
Oeu009902.1 Olea europaea
Os04g0635900 Oryza sativa ssp. japonica
Os08g0177600 Oryza sativa ssp. japonica
Peaxi162Scf00290g00111 Petunia axillaris
PGR083G1158 Punica granatum
PGSC0003DMG400002669 Solanum tuberosum
Phvul.005G085700 Phaseolus vulgaris
Potri.001G407300 Populus trichocarpa
Pp3c24_2350 Physcomitrium patens
PRCOL_00003292 Prasinoderma coloniale
Prupe.4G191100 Prunus persica
Psat2g184560 Pisum sativum
PSO210G7030 Papaver somniferum
PSO832G2870 Papaver somniferum
QL08p017669 Quercus lobata
RcHm_v2.0_Chr5g0036071 Rosa chinensis
RhsimUnG0258300 Rhododendron simsii
Sabra16G0268700 Salix brachista
Sabra16G0270900 Salix brachista
SalBow3G2312 Salvia bowleyana
Sc03g0009580 Simmondsia chinensis
Sed0012869 Sechium edule
SEGI_22122 Sequoiadendron giganteum
SEGI_32923 Sequoiadendron giganteum
SEGI_35588 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06767 Striga asiatica
SHI33827 Sapria himalayana
SMO347G0170 Selaginella moellendorffii
Sopen00g012230 Solanum pennellii
Sopen00g013530 Solanum pennellii
Sopen09g004090 Solanum pennellii
Sp6g16300 Schrenkiella parvula
TAR629G3355 Trochodendron aralioides
THA.LOC104811844 Tarenaya hassleriana
THA.LOC104813315 Tarenaya hassleriana
Thecc.07G070700 Theobroma cacao
Thhalv10012804m.g Eutrema salsugineum
TPR.G32857 Trifolium pratense
unitig_13.g31430 Utricularia gibba
unitig_8.g4146 Utricularia gibba
vmacro09564 Vaccinium macrocarpon
VMungo1080G1535 Vigna mungo
Zm00001eb069270 Zea mays
Zm00001eb171920 Zea mays

User provided reference genes

Program Settings