Gene: Carub.0008s1460

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s1460
  • Transcript Identifier Carub.0008s1460.1
  • Gene Type Coding gene
  • Location scaffold_8 : 8133181-8138372 : positive

Gene Family Information

  • ID HOM05D005363
  • #Genes/#Species 142/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s1460.v1.1
  • pacid 39253061
  • synonym Carubv10025971m.g

Descriptions

  • Description K10865 - double-strand break repair protein MRE11 (MRE11)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006302
IEA
InterProdouble-strand break repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004520
IEA
InterProendodeoxyribonuclease activity
GO:0008296
IEA
InterPro3'-5'-exodeoxyribonuclease activity
GO:0004519
IEA
InterProendonuclease activity
GO:0030145
IEA
InterPromanganese ion binding
GO:0016787
IEA
InterProhydrolase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G54260

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030870
IEA
InterProMre11 complex
GO:0005634
IEA
InterPronucleus
GO:0000791
ISO
PLAZA Integrative Orthologyeuchromatin AT5G54260
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT5G54260
GO:0000795
ISO
PLAZA Integrative Orthologysynaptonemal complex AT5G54260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029052 Metallo-dependent phosphatase-like
IPR003701 DNA double-strand break repair protein Mre11
IPR007281 Mre11, DNA-binding
IPR004843 Calcineurin-like phosphoesterase domain, ApaH type
IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain
IPR038487 Mre11, capping domain
Mapman id Description
13.3.5.3.1.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break processing.MRE11-RAD50-NBS1 (MRN) complex.component MRE11
14.3.3.1 DNA damage response.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.component MRE11