Gene: Zm00001eb171920

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb171920
  • Transcript Identifier Zm00001eb171920_T001
  • Gene Type Coding gene
  • Location 4 : 31840361-31845749 : positive

Gene Family Information

  • ID HOM05D005363
  • #Genes/#Species 142/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb171920_T001
  • pid Zm00001eb171920_P001
  • uniprot A0A3L6F0Y2
  • uniprot A5YZR9
  • uniprot A0A1D6PV53
  • uniprot A0A3L6F1H5
  • entrez 100125648
  • refseq NM_001112579.1
  • refseq NP_001106049.1
  • V4_identifier Zm00001d049471

Descriptions

  • Description Zm00001e021669
  • Description MRE11B
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042138
IBA
GOA Databasemeiotic DNA double-strand break formation
GO:0097552
IBA
GOA Databasemitochondrial double-strand break repair via homologous recombination
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0006302
IEA
GOA Databasedouble-strand break repair
GO:0006302
IEA
InterProdouble-strand break repair
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0000724
IBA
GOA Databasedouble-strand break repair via homologous recombination
GO:0000723
IBA
GOA Databasetelomere maintenance
GO:0007095
IBA
GOA Databasemitotic G2 DNA damage checkpoint signaling
GO:0006303
IBA
GOA Databasedouble-strand break repair via nonhomologous end joining

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030145
IEA
GOA Databasemanganese ion binding
GO:0030145
IEA
InterPromanganese ion binding
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004519
IEA
InterProendonuclease activity
GO:0000014
IBA
GOA Databasesingle-stranded DNA endodeoxyribonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IEA
InterProhydrolase activity
GO:0004520
IEA
GOA Databaseendodeoxyribonuclease activity
GO:0004520
IEA
InterProendodeoxyribonuclease activity
GO:0008296
IEA
GOA Database3'-5'-exodeoxyribonuclease activity
GO:0008296
IEA
InterPro3'-5'-exodeoxyribonuclease activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G54260
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004527
IEA
GOA Databaseexonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035861
IBA
GOA Databasesite of double-strand break
GO:0030870
IBA
IEA
GOA DatabaseMre11 complex
GO:0030870
IEA
InterProMre11 complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0000791
ISO
PLAZA Integrative Orthologyeuchromatin AT5G54260
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT5G54260
GO:0000795
ISO
PLAZA Integrative Orthologysynaptonemal complex AT5G54260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007281 Mre11, DNA-binding
IPR029052 Metallo-dependent phosphatase-like
IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain
IPR038487 Mre11, capping domain
IPR004843 Calcineurin-like phosphoesterase domain, ApaH type
IPR003701 DNA double-strand break repair protein Mre11
Mapman id Description
13.3.5.3.1.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break processing.MRE11-RAD50-NBS1 (MRN) complex.component MRE11
14.3.3.1 DNA damage response.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.component MRE11