Gene: CSS0003917

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0003917
  • Transcript Identifier CSS0003917.1
  • Gene Type Coding gene
  • Location Chr5 : 23582995-23596734 : negative

Gene Family Information

  • ID HOM05D005363
  • #Genes/#Species 142/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0003917.1

Descriptions

  • Description PREDICTED: double-strand break repair protein MRE11 isoform X2 [Vitis vinifera]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006302
IEA
InterProdouble-strand break repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
InterProhydrolase activity
GO:0004520
IEA
InterProendodeoxyribonuclease activity
GO:0008296
IEA
InterPro3'-5'-exodeoxyribonuclease activity
GO:0004519
IEA
InterProendonuclease activity
GO:0030145
IEA
InterPromanganese ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G54260

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030870
IEA
InterProMre11 complex
GO:0005634
IEA
InterPronucleus
GO:0000791
ISO
PLAZA Integrative Orthologyeuchromatin AT5G54260
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT5G54260
GO:0000795
ISO
PLAZA Integrative Orthologysynaptonemal complex AT5G54260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain
IPR029052 Metallo-dependent phosphatase-like
IPR004843 Calcineurin-like phosphoesterase domain, ApaH type
IPR003701 DNA double-strand break repair protein Mre11
IPR007281 Mre11, DNA-binding
IPR038487 Mre11, capping domain
Mapman id Description
13.3.5.3.1.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break processing.MRE11-RAD50-NBS1 (MRN) complex.component MRE11
14.3.3.1 DNA damage response.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.component MRE11