Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p19140 Brassica napus
Aa31LG2G11550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1952 Anthoceros agrestis
Actinidia16845 Actinidia chinensis
Actinidia16846 Actinidia chinensis
Actinidia35531 Actinidia chinensis
Ah.06g189010 Amaranthus hybridus
AL1G65920 Arabidopsis lyrata
Aqoxy6G02436 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1QQ1RG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.77BPS2 Arachis hypogaea
AT1G56310 Arabidopsis thaliana
ATR0706G045 Amborella trichopoda
Atru.chr2.137 Acer truncatum
Atru.chr2.142 Acer truncatum
AUR62000693 Chenopodium quinoa
AUR62005265 Chenopodium quinoa
BcaB07g31118 Brassica carinata
BcaC04g22042 Brassica carinata
BolC9t55332H Brassica oleracea
BraA09t37532Z Brassica rapa
C09p24140 Brassica napus
CAN.G1273.4 Capsicum annuum
CANSAT54G2643 Cannabis sativa
CARHR289850 Cardamine hirsuta
Carub.0002s0785 Capsella rubella
Ca_10160_v3 Cicer arietinum L.
CBR_g47086 Chara braunii
Cc02_g34760 Coffea canephora
Ciclev10000759m.g Citrus clementina
CiPaw.07G027300 Carya illinoinensis
CiPaw.08G157000 Carya illinoinensis
ClCG03G017650 Citrullus lanatus
COL.COLO4_04134 Corchorus olitorius
Cpa.g.sc48.138 Carica papaya
Cre02.g083900 Chlamydomonas reinhardtii
Cre10.g445150 Chlamydomonas reinhardtii
CsaV3_1G038340 Cucumis sativus L.
CSS0043675 Camellia sinensis var. sinensis
DCAR_005413 Daucus carota
DCAR_025270 Daucus carota
Dinv30866 Davidia involucrata
Duzib177G0912 Durio zibethinus
ECA234G3067 Erigeron canadensis
EL10Ac4g08339 Beta vulgaris
Eucgr.B01653 Eucalyptus grandis
Eucgr.B02058 Eucalyptus grandis
Eucgr.B02091 Eucalyptus grandis
FAN04G2120 Fragaria x ananassa
FAN05G4787 Fragaria x ananassa
FAN08G1915 Fragaria x ananassa
FAN09G0306 Fragaria x ananassa
FAN14G4398 Fragaria x ananassa
FvH4_5g34880 Fragaria vesca
FvH4_6g07170 Fragaria vesca
Glyma.10G148600 Glycine max
Glyma.20G239300 Glycine max
Gohir.A13G111600 Gossypium hirsutum
Gohir.D13G114500 Gossypium hirsutum
Gorai.013G128600 Gossypium raimondii
GSVIVG01031212001 Vitis vinifera
HanXRQChr10g0299251 Helianthus annuus
Haze_04086 Corylus avellana
HPP92_001070 Vanilla planifolia
Hund07131 Selenicereus undatus
Lalb_Chr02g0147921 Lupinus albus
Lalb_Chr21g0310361 Lupinus albus
Lj5C338G3 Lonicera japonica
Lj5g0016289 Lotus japonicus
Lj9A208G25 Lonicera japonica
Lsat_1_v5_gn_5_102760 Lactuca sativa
Manes.08G112700 Manihot esculenta
Mapoly0054s0112 Marchantia polymorpha
MBI18_g24951_MAGBIO Magnolia biondii
MCO02G089 Micromonas commoda
MCO07G154 Micromonas commoda
MCO08G054 Micromonas commoda
MCO13G281 Micromonas commoda
MD04G1195700 Malus domestica
MD12G1208000 Malus domestica
MELO3C015263.2 Cucumis melo
MELO3C034824.2 Cucumis melo
MELO3C035005.2 Cucumis melo
Migut.H01140 Erythranthe guttata
Migut.N02108 Erythranthe guttata
MSTRG.27959 Avicennia marina
Nitab4.5_0000368g0310 Nicotiana tabacum
Nitab4.5_0006072g0040 Nicotiana tabacum
Nn3g21622 Nelumbo nucifera
Oeu053699.1 Olea europaea
Oeu064805.1 Olea europaea
Os05g0357100 Oryza sativa ssp. japonica
Peaxi162Scf00673g00026 Petunia axillaris
PGR083G2525 Punica granatum
PGSC0003DMG400002810 Solanum tuberosum
Phvul.007G200000 Phaseolus vulgaris
Potri.005G020000 Populus trichocarpa
PRCOL_00002312 Prasinoderma coloniale
PRCOL_00005854 Prasinoderma coloniale
PRCOL_00006842 Prasinoderma coloniale
Prupe.6G315500 Prunus persica
Psat0s1118g0080 Pisum sativum
PSO170G3617 Papaver somniferum
PSO357G0277 Papaver somniferum
PSO591G0378 Papaver somniferum
PSO832G4367 Papaver somniferum
QL03p018132 Quercus lobata
RcHm_v2.0_Chr3g0456811 Rosa chinensis
RcHm_v2.0_Chr7g0235801 Rosa chinensis
Rhsim11G0093500 Rhododendron simsii
Sabra05G0026100 Salix brachista
SalBow3G1325 Salvia bowleyana
Sc09g0002730 Simmondsia chinensis
Sed0027360 Sechium edule
SEGI_00954 Sequoiadendron giganteum
SEGI_08809 Sequoiadendron giganteum
SEGI_11127 Sequoiadendron giganteum
SEGI_17557 Sequoiadendron giganteum
SEGI_19401 Sequoiadendron giganteum
SEGI_24449 Sequoiadendron giganteum
SEGI_28492 Sequoiadendron giganteum
SEGI_30725 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25882 Striga asiatica
SHI18068 Sapria himalayana
SHI49009 Sapria himalayana
SHI49010 Sapria himalayana
SHI49397 Sapria himalayana
SHI49398 Sapria himalayana
Solyc01g100270.4 Solanum lycopersicum
Sopen01g043780 Solanum pennellii
Sp2g06550 Schrenkiella parvula
TAR362G0767 Trochodendron aralioides
TAR365G0822 Trochodendron aralioides
THA.LOC104805911 Tarenaya hassleriana
Thecc.05G320500 Theobroma cacao
Thhalv10023373m.g Eutrema salsugineum
TPR.G2615 Trifolium pratense
TWI56G0631 Tripterygium wilfordii
unitig_0.g2322 Utricularia gibba
vmacro01549 Vaccinium macrocarpon
VMungo0720G2281 Vigna mungo
Zm00001eb347420 Zea mays

User provided reference genes

Program Settings