Gene: Solyc01g100270.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g100270.4
  • Transcript Identifier Solyc01g100270.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 82602951-82615065 : positive

Gene Family Information

  • ID HOM05D005361
  • #Genes/#Species 142/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g100270.4.1
  • uniprot A0A3Q7ENU7
  • gene_id Solyc01g100270

Descriptions

  • Description exonuclease mut-7 homolog isoform X1 (AHRD V3.3 *** A0A2I4EA87_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006139
IEA
GOA Databasenucleobase-containing compound metabolic process
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0030422
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in RNA interference AT1G56310
GO:0010587
ISO
PLAZA Integrative OrthologymiRNA catabolic process AT1G56310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008408
IBA
IEA
GOA Database3'-5' exonuclease activity
GO:0008408
IEA
InterPro3'-5' exonuclease activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G56310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010494
ISO
PLAZA Integrative Orthologycytoplasmic stress granule AT1G56310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR002562 3'-5' exonuclease domain
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
35.1 not assigned.annotated