Gene: Lj5C338G3

General Information

Structural Information

  • Species Lonicera japonica
  • Gene Identifier Lj5C338G3
  • Transcript Identifier Lj5C338G3.1
  • Gene Type Coding gene
  • Location GWHAAZE00000005 : 33777442-33808192 : negative

Gene Family Information

  • ID HOM05D005361
  • #Genes/#Species 142/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Lj5C338G3.1
  • Accession GWHGAAZE019204
  • Accession GWHTAAZE019226

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006310
IEA
InterProDNA recombination
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0030422
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in RNA interference AT1G56310
GO:0010587
ISO
PLAZA Integrative OrthologymiRNA catabolic process AT1G56310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0004386
IEA
InterProhelicase activity
GO:0008408
IEA
InterPro3'-5' exonuclease activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G56310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010494
ISO
PLAZA Integrative Orthologycytoplasmic stress granule AT1G56310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR001650 Helicase, C-terminal
IPR004589 DNA helicase, ATP-dependent, RecQ type
IPR002562 3'-5' exonuclease domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
35.1 not assigned.annotated