Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23360 Brassica napus
A05p27300 Brassica napus
A06p35760 Brassica napus
Aa31LG8G8010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3132 Anthoceros agrestis
Actinidia21733 Actinidia chinensis
Actinidia21734 Actinidia chinensis
Ah.01g017050 Amaranthus hybridus
AL3G35360 Arabidopsis lyrata
Aqoxy7G03942 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.412K95 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CL3NUC Arachis hypogaea
AT3G21300 Arabidopsis thaliana
ATR0789G110 Amborella trichopoda
Atru.chr1.2049 Acer truncatum
Atru.chr1.35 Acer truncatum
Atru.chr1.3604 Acer truncatum
Atru.chr1.3605 Acer truncatum
Atru.chr11.191 Acer truncatum
Atru.chr7.121 Acer truncatum
Atru.chr8.582 Acer truncatum
AUR62022290 Chenopodium quinoa
AUR62022292 Chenopodium quinoa
AUR62023880 Chenopodium quinoa
BcaB06g26221 Brassica carinata
BcaC04g19026 Brassica carinata
BcaC05g28181 Brassica carinata
BcaC05g28683 Brassica carinata
BcaC08g47183 Brassica carinata
BolC5t32949H Brassica oleracea
BraA03t14429Z Brassica rapa
BraA05t21622Z Brassica rapa
BraA06t26500Z Brassica rapa
BraA07t29116Z Brassica rapa
BraA09t38361Z Brassica rapa
C05p42210 Brassica napus
CAN.G1143.37 Capsicum annuum
CANSAT56G3252 Cannabis sativa
CARHR097230 Cardamine hirsuta
Carub.0003s2133 Capsella rubella
Ca_01178_v3 Cicer arietinum L.
CBR_g9138 Chara braunii
Cc04_g02310 Coffea canephora
Cfa003614 Carpinus fangiana
Ciclev10025277m.g Citrus clementina
CiPaw.02G142800 Carya illinoinensis
ClCG09G000480 Citrullus lanatus
COL.COLO4_30571 Corchorus olitorius
Cpa.g.sc131.16 Carica papaya
Cpa.g.sc131.17 Carica papaya
Cre12.g501100 Chlamydomonas reinhardtii
CsaV3_7G034980 Cucumis sativus L.
CSS0048704 Camellia sinensis var. sinensis
DCAR_031420 Daucus carota
Dinv37942 Davidia involucrata
Duzib192G0447 Durio zibethinus
ECA247G0411 Erigeron canadensis
ECA247G0873 Erigeron canadensis
EL10Ac9g21148 Beta vulgaris
Eucgr.J02891 Eucalyptus grandis
Eucgr.J02895 Eucalyptus grandis
FAN02G1148 Fragaria x ananassa
FAN02G2896 Fragaria x ananassa
FAN09G2417 Fragaria x ananassa
FAN14G3972 Fragaria x ananassa
FvH4_6g32800 Fragaria vesca
Glyma.13G352500 Glycine max
Glyma.15G022200 Glycine max
Gohir.A10G063600 Gossypium hirsutum
Gohir.D10G065200 Gossypium hirsutum
Gorai.011G069100 Gossypium raimondii
GSVIVG01016904001 Vitis vinifera
HanXRQChr04g0095951 Helianthus annuus
Haze_15911 Corylus avellana
Hma1.2p1_0388F.1_g142030 Hydrangea macrophylla
Hma1.2p1_0388F.1_g142040 Hydrangea macrophylla
Hma1.2p1_0388F.1_g142050 Hydrangea macrophylla
HPP92_002841 Vanilla planifolia
HPP92_008116 Vanilla planifolia
HPP92_012307 Vanilla planifolia
Hund00732 Selenicereus undatus
Hund04531 Selenicereus undatus
Hund27772 Selenicereus undatus
Hund27773 Selenicereus undatus
Hund27776 Selenicereus undatus
Hund27777 Selenicereus undatus
Lalb_Chr14g0372921 Lupinus albus
Lalb_Chr14g0372931 Lupinus albus
Lj3g0001017 Lotus japonicus
Lj5A50G63 Lonicera japonica
Lsat_1_v5_gn_1_36600 Lactuca sativa
Manes.11G029600 Manihot esculenta
Mapoly0054s0113 Marchantia polymorpha
MBI01_g16587_MAGBIO Magnolia biondii
MCO09G155 Micromonas commoda
MD10G1214000 Malus domestica
MD17G1179000 Malus domestica
MD17G1227200 Malus domestica
Medtr2g100500 Medicago truncatula
MELO3C024409.2 Cucumis melo
Migut.I00980 Erythranthe guttata
Migut.I00986 Erythranthe guttata
MSTRG.22612 Avicennia marina
Nitab4.5_0009106g0020 Nicotiana tabacum
Nitab4.5_0009613g0010 Nicotiana tabacum
Nn8g38966 Nelumbo nucifera
Oeu052821.2 Olea europaea
Os01g0193600 Oryza sativa ssp. japonica
Peaxi162Scf00038g01234 Petunia axillaris
PGR102G1400 Punica granatum
PGSC0003DMG400002513 Solanum tuberosum
Phvul.005G161800 Phaseolus vulgaris
Potri.001G194701 Populus trichocarpa
Potri.001G195300 Populus trichocarpa
Pp3c25_5440 Physcomitrium patens
Pp3s32_330 Physcomitrium patens
PRCOL_00006587 Prasinoderma coloniale
Prupe.3G054000 Prunus persica
Psat5g294640 Pisum sativum
Psat5g294680 Pisum sativum
PSO210G0066 Papaver somniferum
PSO210G6279 Papaver somniferum
QL05p016421 Quercus lobata
RcHm_v2.0_Chr2g0141991 Rosa chinensis
Rhsim08G0230200 Rhododendron simsii
Sabra01G0143000 Salix brachista
SalBow6G0343 Salvia bowleyana
Sc15g0000030 Simmondsia chinensis
Sed0006988 Sechium edule
SEGI_17876 Sequoiadendron giganteum
SGA_v2.0_scaffold71G23736 Striga asiatica
SMO118G0221 Selaginella moellendorffii
Solyc03g121260.3 Solanum lycopersicum
Sopen03g040070 Solanum pennellii
Sp3g19360 Schrenkiella parvula
TAR636G1794 Trochodendron aralioides
Thecc.06G105100 Theobroma cacao
Thhalv10020447m.g Eutrema salsugineum
Thhalv10021840m.g Eutrema salsugineum
TPR.G6542 Trifolium pratense
unitig_32.g11583 Utricularia gibba
vmacro18831 Vaccinium macrocarpon
VMungo1080G0616 Vigna mungo
Zm00001eb121120 Zea mays

User provided reference genes

Program Settings