Gene: COL.COLO4_30571

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_30571
  • Transcript Identifier COL.rna29286
  • Gene Type Coding gene
  • Location AWUE01020751.1 : 116325-123289 : negative

Gene Family Information

  • ID HOM05D005216
  • #Genes/#Species 144/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna29286
  • GenBank OMO66442.1
  • id gene30543
  • gene_name COLO4_30571
  • uniprot A0A1R3H7X1

Descriptions

  • Description RNA methyltransferase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001510
IEA
GOA DatabaseRNA methylation
GO:0032259
IEA
GOA Databasemethylation
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G21300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008173
IEA
GOA DatabaseRNA methyltransferase activity
GO:0008173
IEA
InterProRNA methyltransferase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G21300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010280 (Uracil-5)-methyltransferase family
IPR025521 Neprosin activation peptide
IPR012340 Nucleic acid-binding, OB-fold
IPR004314 Neprosin
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
Mapman id Description
16.5.7.7 RNA processing.RNA modification.tRNA methylation.tRNA uridine-methyltransferase (TRM2)