Gene: Sopen03g040070

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g040070
  • Transcript Identifier Sopen03g040070.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 73999263-74006061 : negative

Gene Family Information

  • ID HOM05D005216
  • #Genes/#Species 144/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g040070.1

Descriptions

  • Description RNA methyltransferase family protein | FUNCTIONS IN: RNA binding, RNA methyltransferase activity | INVOLVED IN: RNA processing | EXPRESSED IN: 12 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like , 23S rRNA methyltransferase/RumA , (Uracil-5)-methyltransferase , Deoxyribonuclease/rho motif-related TRAM | BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G21300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008173
IEA
InterProRNA methyltransferase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G21300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR010280 (Uracil-5)-methyltransferase family
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
16.5.7.7 RNA processing.RNA modification.tRNA methylation.tRNA uridine-methyltransferase (TRM2)