Gene: Sp3g19360

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp3g19360
  • Transcript Identifier Sp3g19360.1
  • Gene Type Coding gene
  • Location ch3-1 : 6936973-6939670 : negative

Gene Family Information

  • ID HOM05D005216
  • #Genes/#Species 144/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp3g19360.v2.2
  • pacid 45077600

Descriptions

  • Description PTHR11061//PTHR11061:SF30 - RNA M5U METHYLTRANSFERASE FAMILY // TRNA (URACIL(54)-C(5))-METHYLTRANSFERASE
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G21300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008173
IEA
InterProRNA methyltransferase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G21300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR010280 (Uracil-5)-methyltransferase family
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
16.5.7.7 RNA processing.RNA modification.tRNA methylation.tRNA uridine-methyltransferase (TRM2)