Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p33930 Brassica napus
Aa31LG1G27100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1828 Anthoceros agrestis
Actinidia09572 Actinidia chinensis
Actinidia31444 Actinidia chinensis
Ah.05g175530 Amaranthus hybridus
AL4G44790 Arabidopsis lyrata
Aqoxy7G00511 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4GMR8R Arachis hypogaea
AT2G45620 Arabidopsis thaliana
ATR0661G093 Amborella trichopoda
Atru.chr5.361 Acer truncatum
AUR62004260 Chenopodium quinoa
AUR62042747 Chenopodium quinoa
BcaB06g29434 Brassica carinata
BcaC02g07079 Brassica carinata
BolC4t28673H Brassica oleracea
BraA04t18854Z Brassica rapa
C04p71740 Brassica napus
CAN.G1561.11 Capsicum annuum
CANSAT56G4462 Cannabis sativa
CARHR140840 Cardamine hirsuta
Carub.0004s2826 Capsella rubella
Ca_20180_v3 Cicer arietinum L.
Ca_20181_v3 Cicer arietinum L.
Cc00_g19600 Coffea canephora
CDE02G0581 Ceratophyllum demersum
CDE02G2105 Ceratophyllum demersum
Cfa001828 Carpinus fangiana
Cfa024725 Carpinus fangiana
Cfa026433 Carpinus fangiana
Ciclev10023615m.g Citrus clementina
CiPaw.01G259000 Carya illinoinensis
CiPaw.02G165000 Carya illinoinensis
ClCG06G000240 Citrullus lanatus
COL.COLO4_31207 Corchorus olitorius
Cpa.g.sc18.161 Carica papaya
Cre10.g455700 Chlamydomonas reinhardtii
CsaV3_6G006030 Cucumis sativus L.
CSS0024486 Camellia sinensis var. sinensis
CSS0026616 Camellia sinensis var. sinensis
DCAR_008569 Daucus carota
Dinv32401 Davidia involucrata
Dinv43736 Davidia involucrata
Duzib138G0662 Durio zibethinus
ECA240G0324 Erigeron canadensis
EL10Ac1g00917 Beta vulgaris
EL10Ac8g19930 Beta vulgaris
Eucgr.D02429 Eucalyptus grandis
Eucgr.D02430 Eucalyptus grandis
FAN01G1647 Fragaria x ananassa
FAN03G1702 Fragaria x ananassa
FAN06G0597 Fragaria x ananassa
FAN06G0957 Fragaria x ananassa
FAN10G1433 Fragaria x ananassa
FAN10G3320 Fragaria x ananassa
FvH4_7g12540 Fragaria vesca
Glyma.03G020100 Glycine max
Glyma.07G082200 Glycine max
Gohir.A02G091900 Gossypium hirsutum
Gohir.A03G095650 Gossypium hirsutum
Gohir.A11G083300 Gossypium hirsutum
Gohir.A12G102600 Gossypium hirsutum
Gohir.D11G087400 Gossypium hirsutum
Gohir.D11G087460 Gossypium hirsutum
Gohir.D12G105800 Gossypium hirsutum
Gorai.007G093300 Gossypium raimondii
Gorai.008G115100 Gossypium raimondii
Gorai.010G161200 Gossypium raimondii
GSVIVG01027570001 Vitis vinifera
HanXRQChr03g0093651 Helianthus annuus
Haze_16720 Corylus avellana
Hma1.2p1_0033F.1_g020810 Hydrangea macrophylla
HPP92_014573 Vanilla planifolia
HPP92_014586 Vanilla planifolia
Hund27339 Selenicereus undatus
Lalb_Chr07g0189491 Lupinus albus
Lalb_Chr12g0208461 Lupinus albus
Lj3g0017003 Lotus japonicus
Lj7A525G51 Lonicera japonica
Lsat_1_v5_gn_2_8360 Lactuca sativa
Lsat_1_v5_gn_3_135321 Lactuca sativa
Lsat_1_v5_gn_5_76180 Lactuca sativa
Manes.05G042700 Manihot esculenta
Mapoly0079s0057 Marchantia polymorpha
MBI04_g22605_MAGBIO Magnolia biondii
MD02G1198200 Malus domestica
Medtr8g033420 Medicago truncatula
Medtr8g033430 Medicago truncatula
Medtr8g035490 Medicago truncatula
MELO3C022514.2 Cucumis melo
Migut.B01666 Erythranthe guttata
Migut.N01409 Erythranthe guttata
MSTRG.17219 Avicennia marina
MSTRG.20775 Avicennia marina
Nitab4.5_0002436g0100 Nicotiana tabacum
Nitab4.5_0008042g0040 Nicotiana tabacum
Nn6g34331 Nelumbo nucifera
Oeu008624.1 Olea europaea
Os02g0122100 Oryza sativa ssp. japonica
Os10g0188300 Oryza sativa ssp. japonica
Peaxi162Scf00988g00323 Petunia axillaris
PGR031G2766 Punica granatum
PGSC0003DMG400000138 Solanum tuberosum
Phvul.010G086700 Phaseolus vulgaris
Potri.002G151000 Populus trichocarpa
Potri.014G073300 Populus trichocarpa
Pp3c2_23720 Physcomitrium patens
PRCOL_00001638 Prasinoderma coloniale
Prupe.2G149800 Prunus persica
Psat4g150880 Pisum sativum
PSO478G0855 Papaver somniferum
PSO782G2935 Papaver somniferum
QL08p051359 Quercus lobata
QL93p0336_0055 Quercus lobata
RcHm_v2.0_Chr1g0351451 Rosa chinensis
Rhsim07G0023700 Rhododendron simsii
Sabra02G0119300 Salix brachista
Sabra14G0052300 Salix brachista
SalBow7G2728 Salvia bowleyana
Sc02g0002360 Simmondsia chinensis
Sed0025531 Sechium edule
SEGI_20485 Sequoiadendron giganteum
SGA_v2.0_scaffold153G37048 Striga asiatica
SGA_v2.0_scaffold95G28881 Striga asiatica
SMO144G0107 Selaginella moellendorffii
Solyc01g094000.3 Solanum lycopersicum
Solyc02g055390.2 Solanum lycopersicum
Sopen01g037820 Solanum pennellii
Sp4g27670 Schrenkiella parvula
TAR629G0531 Trochodendron aralioides
TAR629G1488 Trochodendron aralioides
THA.LOC104802001 Tarenaya hassleriana
THA.LOC104827620 Tarenaya hassleriana
Thecc.01G372200 Theobroma cacao
Thhalv10001324m.g Eutrema salsugineum
TPR.G15434 Trifolium pratense
TWI14G0649 Tripterygium wilfordii
TWI23G0741 Tripterygium wilfordii
unitig_0.g1293 Utricularia gibba
vmacro13362 Vaccinium macrocarpon
VMungo0331G0422 Vigna mungo
VMungo0331G1088 Vigna mungo
Zm00001eb224220 Zea mays
Zm00001eb230480 Zea mays
Zm00001eb262660 Zea mays

User provided reference genes

Program Settings