Gene: Cc00_g19600

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc00_g19600
  • Transcript Identifier Cc00_g19600.1
  • Gene Type Coding gene
  • Location chr0 : 126130302-126137060 : positive

Gene Family Information

  • ID HOM05D005142
  • #Genes/#Species 146/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB O74326
  • UniProtKB F6I349
  • UniProtKB Q5VYS8
  • UniProtKB A5BY57
  • UniProtKB E6NU32
  • UniProtKB Q9UT49
  • id GSCOCG00004545001

Descriptions

  • Description Putative Nucleotidyltransferase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071076
ISO
PLAZA Integrative OrthologyRNA 3' uridylation AT2G45620
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT2G45620
GO:1903705
ISO
PLAZA Integrative Orthologypositive regulation of production of siRNA involved in RNA interference AT2G45620
GO:1900369
ISO
PLAZA Integrative Orthologynegative regulation of RNA interference AT2G45620
GO:0000289
ISO
PLAZA Integrative Orthologynuclear-transcribed mRNA poly(A) tail shortening AT2G45620
GO:0060964
ISO
PLAZA Integrative Orthologyregulation of gene silencing by miRNA AT2G45620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016779
IEA
InterPronucleotidyltransferase activity
GO:0050265
ISO
PLAZA Integrative OrthologyRNA uridylyltransferase activity AT2G45620
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G45620
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G45620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045100 TUTase nucleotidyltransferase domain
IPR002058 PAP/25A-associated
IPR043519 Nucleotidyltransferase superfamily
Mapman id Description
16.9.2.9.2 RNA processing.mRNA silencing.miRNA pathway.miRNA uridylation and cytidylation.uridylyltransferase (URT1)