Gene: Pp3c2_23720

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c2_23720
  • Transcript Identifier Pp3c2_23720V3.3
  • Gene Type Coding gene
  • Location Chr02 : 15893780-15899024 : positive

Gene Family Information

  • ID HOM05D005142
  • #Genes/#Species 146/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c2_23720V3.3
  • pacid 32935071
  • alias Pp1s135_64V6
  • alias Phypa_167080
  • alias Phypa_189614
  • uniprot A0A2K1L2S6

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031123
IBA
GOA DatabaseRNA 3'-end processing
GO:0071076
IBA
GOA DatabaseRNA 3' uridylation
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT2G45620
GO:1903705
ISO
PLAZA Integrative Orthologypositive regulation of production of siRNA involved in RNA interference AT2G45620
GO:1900369
ISO
PLAZA Integrative Orthologynegative regulation of RNA interference AT2G45620
GO:0000289
ISO
PLAZA Integrative Orthologynuclear-transcribed mRNA poly(A) tail shortening AT2G45620
GO:0060964
ISO
PLAZA Integrative Orthologyregulation of gene silencing by miRNA AT2G45620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016779
IBA
IEA
GOA Databasenucleotidyltransferase activity
GO:0016779
IEA
InterPronucleotidyltransferase activity
GO:0050265
IBA
GOA DatabaseRNA uridylyltransferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G45620
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G45620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043519 Nucleotidyltransferase superfamily
IPR045100 TUTase nucleotidyltransferase domain
IPR002058 PAP/25A-associated
Mapman id Description
16.9.2.9.2 RNA processing.mRNA silencing.miRNA pathway.miRNA uridylation and cytidylation.uridylyltransferase (URT1)