Gene: Sopen01g037820

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g037820
  • Transcript Identifier Sopen01g037820.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 95825670-95835896 : negative

Gene Family Information

  • ID HOM05D005142
  • #Genes/#Species 146/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g037820.1

Descriptions

  • Description Nucleotidyltransferase family protein | FUNCTIONS IN: nucleotidyltransferase activity | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain , PAP/25A-associated | BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071076
ISO
PLAZA Integrative OrthologyRNA 3' uridylation AT2G45620
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT2G45620
GO:1903705
ISO
PLAZA Integrative Orthologypositive regulation of production of siRNA involved in RNA interference AT2G45620
GO:1900369
ISO
PLAZA Integrative Orthologynegative regulation of RNA interference AT2G45620
GO:0000289
ISO
PLAZA Integrative Orthologynuclear-transcribed mRNA poly(A) tail shortening AT2G45620
GO:0060964
ISO
PLAZA Integrative Orthologyregulation of gene silencing by miRNA AT2G45620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016779
IEA
InterPronucleotidyltransferase activity
GO:0050265
ISO
PLAZA Integrative OrthologyRNA uridylyltransferase activity AT2G45620
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G45620
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G45620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002058 PAP/25A-associated
IPR043519 Nucleotidyltransferase superfamily
IPR045100 TUTase nucleotidyltransferase domain
Mapman id Description
16.9.2.9.2 RNA processing.mRNA silencing.miRNA pathway.miRNA uridylation and cytidylation.uridylyltransferase (URT1)