Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09690 Brassica napus
A03p50570 Brassica napus
Aa31LG6G380 Aethionema arabicum
Aa31LG9G15140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis
Actinidia31490 Actinidia chinensis
Ah.12g053860 Amaranthus hybridus
Aqoxy3G02576 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea
AT4G17620 Arabidopsis thaliana
ATR0665G273 Amborella trichopoda
Atru.chr9.1157 Acer truncatum
AUR62007191 Chenopodium quinoa
AUR62018812 Chenopodium quinoa
BcaC06g33554 Brassica carinata
BcaC09g51625 Brassica carinata
BcaNung00074 Brassica carinata
BcaNung03452 Brassica carinata
BcaNung06713 Brassica carinata
BolC1t01095H Brassica oleracea
BolC1t01096H Brassica oleracea
BolC7t45397H Brassica oleracea
BraA01t00912Z Brassica rapa
BraA03t14147Z Brassica rapa
C01p11300 Brassica napus
C07p48890 Brassica napus
CAN.G572.25 Capsicum annuum
CANSAT21G2106 Cannabis sativa
CARHR224350 Cardamine hirsuta
Carub.0007s2375 Capsella rubella
Ca_24617_v3 Cicer arietinum L.
CBR_g48842 Chara braunii
Cc08_g11170 Coffea canephora
CDE04G2928 Ceratophyllum demersum
CDE12G0612 Ceratophyllum demersum
Cfa024662 Carpinus fangiana
Ciclev10019303m.g Citrus clementina
CiPaw.12G056200 Carya illinoinensis
ClCG09G012630 Citrullus lanatus
COL.COLO4_06693 Corchorus olitorius
Cpa.g.c32337.2 Carica papaya
Cpa.g.sc98.58 Carica papaya
Cre07.g338400 Chlamydomonas reinhardtii
CsaV3_3G049760 Cucumis sativus L.
DCAR_008319 Daucus carota
DCAR_016064 Daucus carota
Dinv00162 Davidia involucrata
Dinv25151 Davidia involucrata
Dinv25152 Davidia involucrata
Dinv28888 Davidia involucrata
Duzib068G0986 Durio zibethinus
ECA233G4689 Erigeron canadensis
ECA240G1687 Erigeron canadensis
EL10Ac5g12239 Beta vulgaris
Eucgr.D02138 Eucalyptus grandis
FAN04G2093 Fragaria x ananassa
FAN08G1378 Fragaria x ananassa
FAN13G1317 Fragaria x ananassa
FAN18G3556 Fragaria x ananassa
FvH4_5g20680 Fragaria vesca
Glyma.01G204000 Glycine max
Glyma.11G039000 Glycine max
Gohir.A08G083762 Gossypium hirsutum
Gohir.A08G162300 Gossypium hirsutum
Gohir.D08G182300 Gossypium hirsutum
Gorai.004G191200 Gossypium raimondii
GSVIVG01001794001 Vitis vinifera
GSVIVG01013283001 Vitis vinifera
GSVIVG01013286001 Vitis vinifera
HanXRQChr03g0089631 Helianthus annuus
Haze_08349 Corylus avellana
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla
HPP92_020526 Vanilla planifolia
HPP92_022002 Vanilla planifolia
HPP92_028085 Vanilla planifolia
Hund14471 Selenicereus undatus
Lalb_Chr09g0324091 Lupinus albus
Lj2C253G13 Lonicera japonica
Lj2g0026795 Lotus japonicus
Lj9A525T29 Lonicera japonica
Lsat_1_v5_gn_6_94760 Lactuca sativa
Manes.01G182900 Manihot esculenta
Mapoly0062s0029 Marchantia polymorpha
MBI04_g38568_MAGBIO Magnolia biondii
MBI04_g46822_MAGBIO Magnolia biondii
MCO13G373 Micromonas commoda
MD00G1132300 Malus domestica
MD06G1045500 Malus domestica
MD10G1199900 Malus domestica
Medtr5g013580 Medicago truncatula
MELO3C003340.2 Cucumis melo
Migut.F01520 Erythranthe guttata
MSTRG.13768 Avicennia marina
Nitab4.5_0004689g0020 Nicotiana tabacum
Nitab4.5_0012059g0010 Nicotiana tabacum
Nn1g00730 Nelumbo nucifera
Nn6g33739 Nelumbo nucifera
Oeu017029.1 Olea europaea
Oeu017031.1 Olea europaea
Oeu062963.3 Olea europaea
Os05g0392100 Oryza sativa ssp. japonica
Peaxi162Scf00209g00227 Petunia axillaris
Peaxi162Scf00301g01111 Petunia axillaris
Peaxi162Scf00715g00010 Petunia axillaris
PGR031G2829 Punica granatum
PGSC0003DMG400001826 Solanum tuberosum
Phvul.002G002400 Phaseolus vulgaris
Potri.001G149900 Populus trichocarpa
Pp3c10_5020 Physcomitrium patens
Prupe.5G053400 Prunus persica
Psat1g146680 Pisum sativum
Psat2g175480 Pisum sativum
PSO063G3549 Papaver somniferum
PSO782G2508 Papaver somniferum
QL12p008469 Quercus lobata
QL12p008508 Quercus lobata
QL12p008516 Quercus lobata
QL12p008547 Quercus lobata
RcHm_v2.0_Chr7g0206411 Rosa chinensis
Rhsim07G0119600 Rhododendron simsii
Sabra01G0119900 Salix brachista
Sc01g0007900 Simmondsia chinensis
Sed0013740 Sechium edule
Sed0020438 Sechium edule
SEGI_19334 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09272 Striga asiatica
SGA_v2.0_scaffold6G03141 Striga asiatica
SHI07711 Sapria himalayana
SMO259G0041 Selaginella moellendorffii
Solyc08g077750.4 Solanum lycopersicum
Sopen08g026270 Solanum pennellii
Sp7g16510 Schrenkiella parvula
TAR636G3078 Trochodendron aralioides
THA.LOC104798349 Tarenaya hassleriana
THA.LOC104814458 Tarenaya hassleriana
Thecc.03G238100 Theobroma cacao
Thecc.03G238400 Theobroma cacao
Thhalv10024864m.g Eutrema salsugineum
TPR.G22969 Trifolium pratense
TWI60G0080 Tripterygium wilfordii
unitig_699.g19774 Utricularia gibba
vmacro14121 Vaccinium macrocarpon
vmacro23518 Vaccinium macrocarpon
VMungo0239G0001 Vigna mungo
Zm00001eb287280 Zea mays

User provided reference genes

Program Settings