Gene: PGR031G2829

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR031G2829
  • Transcript Identifier PGR031G2829.01
  • Gene Type Coding gene
  • Location NC_045127.1 : 45864378-45868186 : negative

Gene Family Information

  • ID HOM05D005140
  • #Genes/#Species 146/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031378822.1
  • name LOC116194193
  • name XM_031522962.1
  • id gene-LOC116194193
  • uniprot A0A218XPF5

Descriptions

  • product decapping nuclease DXO homolog, chloroplastic, transcript variant X3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0000956
ISO
PLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process AT4G17620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004534
ISO
PLAZA Integrative Orthology5'-3' exoribonuclease activity AT4G17620
GO:0000175
ISO
PLAZA Integrative Orthology3'-5'-exoribonuclease activity AT4G17620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G17620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039039 RAI1-like family
IPR013961 RAI1-like
Mapman id Description
16.4.3.1 RNA processing.RNA surveillance.non-canonical RNA decapping and decay.decapping nuclease (DXO1)