Gene: Sopen08g026270
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g026270
- Transcript Identifier Sopen08g026270.1
- Gene Type Coding gene
- Location Spenn-ch08 : 66081427-66088775 : negative
Gene Family Information
- ID HOM05D005140
- #Genes/#Species 146/96
- Phylogenetic origin
- ID ORTHO05D006288
- #Genes/#Species 145/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen08g026270.1
Descriptions
- Description glycine-rich protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RAI1 like .
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090305 | ISO | PLAZA Integrative Orthology | nucleic acid phosphodiester bond hydrolysis | AT4G17620 |
| GO:0000956 | ISO | PLAZA Integrative Orthology | nuclear-transcribed mRNA catabolic process | AT4G17620 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004534 | ISO | PLAZA Integrative Orthology | 5'-3' exoribonuclease activity | AT4G17620 |
| GO:0000175 | ISO | PLAZA Integrative Orthology | 3'-5'-exoribonuclease activity | AT4G17620 |
| GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT4G17620 |
| GO:0016787 | ISO | PLAZA Integrative Orthology | hydrolase activity | AT4G17620 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G17620 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.4.3.1 | RNA processing.RNA surveillance.non-canonical RNA decapping and decay.decapping nuclease (DXO1) |