Gene: Ah.12g053860

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.12g053860
  • Transcript Identifier Ah.12g053860-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_12 : 2952813-2958534 : negative

Gene Family Information

  • ID HOM05D005140
  • #Genes/#Species 146/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.12g053860-v1.1.a1

Descriptions

  • Description Decapping nuclease DXO homolog, chloroplastic (EC 3.6.1.-)
  • note Decapping nuclease DXO homolog, chloroplastic (EC 3.6.1.-)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
ISO
PLAZA Integrative Orthologynucleic acid phosphodiester bond hydrolysis AT4G17620
GO:0000956
ISO
PLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process AT4G17620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004534
ISO
PLAZA Integrative Orthology5'-3' exoribonuclease activity AT4G17620
GO:0000175
ISO
PLAZA Integrative Orthology3'-5'-exoribonuclease activity AT4G17620
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT4G17620
GO:0016787
ISO
PLAZA Integrative Orthologyhydrolase activity AT4G17620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G17620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039039 RAI1-like family
IPR013961 RAI1-like
Mapman id Description
16.4.3.1 RNA processing.RNA surveillance.non-canonical RNA decapping and decay.decapping nuclease (DXO1)