Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p65370 Brassica napus
A04p08580 Brassica napus
A07p43250 Brassica napus
A09p41080 Brassica napus
Aa31LG4G8070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2614 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2622 Anthoceros agrestis
Actinidia10299 Actinidia chinensis
Actinidia30750 Actinidia chinensis
Ah.16g109530 Amaranthus hybridus
Ah.16g109540 Amaranthus hybridus
AL2G38280 Arabidopsis lyrata
Aqoxy1G01853 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K8DV01 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T10PLA Arachis hypogaea
AT1G78010 Arabidopsis thaliana
ATR0564G350 Amborella trichopoda
Atru.BG.242.p Acer truncatum
Atru.chr13.1265 Acer truncatum
AUR62022347 Chenopodium quinoa
AUR62034358 Chenopodium quinoa
BcaC05g27652 Brassica carinata
BcaC06g36777 Brassica carinata
BcaC06g36780 Brassica carinata
BcaC07g39279 Brassica carinata
BcaC08g47633 Brassica carinata
BcaNung00277 Brassica carinata
BolC2t09540H Brassica oleracea
BolC6t40215H Brassica oleracea
BolC7t40456H Brassica oleracea
BolC7t40457H Brassica oleracea
BolC8t49924H Brassica oleracea
BraA03t15591Z Brassica rapa
BraA04t16552Z Brassica rapa
BraA07t31846Z Brassica rapa
BraA09t39601Z Brassica rapa
C02p35240 Brassica napus
C05p36400 Brassica napus
C06p51930 Brassica napus
C07p00040 Brassica napus
C07p00050 Brassica napus
C08p22880 Brassica napus
C09p47800 Brassica napus
CAN.G517.17 Capsicum annuum
CANSAT54G2794 Cannabis sativa
CARHR071470 Cardamine hirsuta
Carub.0002s2490 Capsella rubella
Ca_15226_v3 Cicer arietinum L.
CBR_g9146 Chara braunii
Cc10_g05860 Coffea canephora
CDE03G0055 Ceratophyllum demersum
Cfa027202 Carpinus fangiana
Ciclev10003846m.g Citrus clementina
CiPaw.05G232900 Carya illinoinensis
ClCG03G008990 Citrullus lanatus
COL.COLO4_16466 Corchorus olitorius
Cpa.g.sc66.92 Carica papaya
Cre16.g681238 Chlamydomonas reinhardtii
CsaV3_5G023620 Cucumis sativus L.
CSS0000538 Camellia sinensis var. sinensis
CSS0031049 Camellia sinensis var. sinensis
DCAR_008707 Daucus carota
Dinv44743 Davidia involucrata
Duzib041G0650 Durio zibethinus
Duzib093G1393 Durio zibethinus
ECA246G0226 Erigeron canadensis
EL10Ac1g01681 Beta vulgaris
Eucgr.F02969 Eucalyptus grandis
FAN04G2698 Fragaria x ananassa
FAN08G1532 Fragaria x ananassa
FAN13G1954 Fragaria x ananassa
FAN18G0258 Fragaria x ananassa
FvH4_5g38010 Fragaria vesca
Glyma.04G105000 Glycine max
Glyma.06G106000 Glycine max
Gohir.A05G229400 Gossypium hirsutum
Gohir.D05G231700 Gossypium hirsutum
Gorai.009G239900 Gossypium raimondii
GSVIVG01008990001 Vitis vinifera
HanXRQChr10g0278501 Helianthus annuus
Haze_00571 Corylus avellana
Hma1.2p1_0120F.1_g057030 Hydrangea macrophylla
Hma1.2p1_0120F.1_g057040 Hydrangea macrophylla
HPP92_016434 Vanilla planifolia
HPP92_016476 Vanilla planifolia
Hund26651 Selenicereus undatus
Lalb_Chr23g0270691 Lupinus albus
Lj1g0017290 Lotus japonicus
Lj4C715T1 Lonicera japonica
Lsat_1_v5_gn_6_102120 Lactuca sativa
Manes.18G070400 Manihot esculenta
Mapoly0034s0013 Marchantia polymorpha
Mapoly0034s0014 Marchantia polymorpha
MBI02_g30882_MAGBIO Magnolia biondii
MBI18_g42472_MAGBIO Magnolia biondii
MCO14G420 Micromonas commoda
MD08G1177300 Malus domestica
MD15G1355000 Malus domestica
Medtr3g073790 Medicago truncatula
MELO3C022795.2 Cucumis melo
MELO3C027298.2 Cucumis melo
MELO3C027311.2 Cucumis melo
MELO3C029590.2 Cucumis melo
MELO3C033259.2 Cucumis melo
MELO3C033719.2 Cucumis melo
Migut.C00179 Erythranthe guttata
Nitab4.5_0000469g0190 Nicotiana tabacum
Nitab4.5_0009824g0010 Nicotiana tabacum
Nn1g05274 Nelumbo nucifera
Oeu024557.1 Olea europaea
Os08g0407000 Oryza sativa ssp. japonica
Peaxi162Scf00310g00019 Petunia axillaris
PGR044G0799 Punica granatum
PGSC0003DMG400009470 Solanum tuberosum
Phvul.009G028601 Phaseolus vulgaris
Potri.002G092600 Populus trichocarpa
Pp3c13_12510 Physcomitrium patens
Pp3c13_12516 Physcomitrium patens
PRCOL_00000127 Prasinoderma coloniale
Prupe.1G511900 Prunus persica
Psat5g137200 Pisum sativum
PSO210G7769 Papaver somniferum
PSO447G0212 Papaver somniferum
QL12p035939 Quercus lobata
QL12p035942 Quercus lobata
RcHm_v2.0_Chr7g0239951 Rosa chinensis
Rhsim06G0085400 Rhododendron simsii
Sabra02G0073100 Salix brachista
SalBow7G0210 Salvia bowleyana
Sc12g0004220 Simmondsia chinensis
Sc12g0004230 Simmondsia chinensis
Sed0012840 Sechium edule
SEGI_22824 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10294 Striga asiatica
SGA_v2.0_scaffold48G18021 Striga asiatica
SMO137G0212 Selaginella moellendorffii
Sopen04g028940 Solanum pennellii
Sp5g33150 Schrenkiella parvula
TAR381G0980 Trochodendron aralioides
THA.LOC104810083 Tarenaya hassleriana
Thecc.08G112000 Theobroma cacao
Thhalv10018349m.g Eutrema salsugineum
TPR.G34614 Trifolium pratense
unitig_0.g2069 Utricularia gibba
vmacro21228 Vaccinium macrocarpon
VMungo1309G2662 Vigna mungo
Zm00001eb178820 Zea mays

User provided reference genes

Program Settings