Gene: Sopen04g028940
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g028940
- Transcript Identifier Sopen04g028940.1
- Gene Type Coding gene
- Location Spenn-ch04 : 70435170-70442195 : positive
Gene Family Information
- ID HOM05D005073
- #Genes/#Species 147/96
- Phylogenetic origin
- ID ORTHO05D006166
- #Genes/#Species 146/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen04g028940.1
Descriptions
- Description tRNA modification GTPase, putative | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: small GTPase mediated signal transduction, tRNA modification | LOCATED IN: intracellular | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Small GTP-binding protein , Ras GTPase , tRNA modification GTPase TrmE , GTP-binding protein TrmE, N-terminal , GTP-binding protein, HSR1-related | BEST Arabidopsis thaliana protein match is: GTP-binding family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006400 | IEA | InterPro | tRNA modification |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR018948 | GTP-binding protein TrmE, N-terminal |
| IPR031168 | TrmE-type guanine nucleotide-binding domain |
| IPR004520 | tRNA modification GTPase MnmE |
| IPR005225 | Small GTP-binding protein domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR006073 | GTP binding domain |
| IPR027368 | tRNA modification GTPase MnmE domain 2 |
| IPR025867 | MnmE, helical domain |
| IPR027266 | GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 |
| Mapman id | Description |
|---|---|
| 16.11.3.1.2 | RNA processing.organelle machinery.RNA modification.tRNA modification.GTPase (TrmE) |