Gene: vmacro21228
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro21228
- Transcript Identifier vmacro21228-RA
- Gene Type Coding gene
- Location chr10_Vaccinium_macrocarpon_Stevens_v1 : 15290693-15295996 : positive
Gene Family Information
- ID HOM05D005073
- #Genes/#Species 147/96
- Phylogenetic origin
- ID ORTHO05D006166
- #Genes/#Species 146/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro21228_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to mnmE: tRNA modification GTPase MnmE (Microcystis aeruginosa (strain NIES-843) OX=449447)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006400 | ISO | PLAZA Homology (enrichment) | tRNA modification | HOM05D005073 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | ISO | PLAZA Homology (enrichment) | GTPase activity | HOM05D005073 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027266 | GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 |
| IPR006073 | GTP binding domain |
| IPR018948 | GTP-binding protein TrmE, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR025867 | MnmE, helical domain |
| IPR005225 | Small GTP-binding protein domain |
| IPR031168 | TrmE-type guanine nucleotide-binding domain |
| IPR027368 | tRNA modification GTPase MnmE domain 2 |
| Mapman id | Description |
|---|---|
| 16.11.3.1.2 | RNA processing.organelle machinery.RNA modification.tRNA modification.GTPase (TrmE) |