Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p26720 Brassica napus
Aa31LG2G19510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis
Actinidia06272 Actinidia chinensis
AL7G21230 Arabidopsis lyrata
Aqoxy1G00293 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea
AT4G30870 Arabidopsis thaliana
AT5G39770 Arabidopsis thaliana
ATR0721G017 Amborella trichopoda
ATR0721G036 Amborella trichopoda
Atru.chr11.2502 Acer truncatum
AUR62002442 Chenopodium quinoa
AUR62026814 Chenopodium quinoa
AUR62037239 Chenopodium quinoa
BcaB01g01761 Brassica carinata
BcaC04g21249 Brassica carinata
BolC9t56223H Brassica oleracea
BraA09t38244Z Brassica rapa
C09p33850 Brassica napus
CAN.G410.46 Capsicum annuum
CANSAT80G2771 Cannabis sativa
CARHR238770 Cardamine hirsuta
Carub.0007s0968 Capsella rubella
Carub.0007s3598 Capsella rubella
Ca_04546_v3 Cicer arietinum L.
CBR_g44528 Chara braunii
Cc02_g29470 Coffea canephora
CDE01G0132 Ceratophyllum demersum
Cfa010847 Carpinus fangiana
Cfa010848 Carpinus fangiana
Ciclev10030882m.g Citrus clementina
CiPaw.13G010200 Carya illinoinensis
ClCG05G020810 Citrullus lanatus
COL.COLO4_25841 Corchorus olitorius
Cpa.g.sc197.13 Carica papaya
Cre12.g555050 Chlamydomonas reinhardtii
CsaV3_5G036480 Cucumis sativus L.
CSS0009317 Camellia sinensis var. sinensis
CSS0024385 Camellia sinensis var. sinensis
CSS0031841 Camellia sinensis var. sinensis
CSS0047173 Camellia sinensis var. sinensis
DCAR_009210 Daucus carota
Dinv32057 Davidia involucrata
Duzib128G1953 Durio zibethinus
ECA232G0518 Erigeron canadensis
EL10Ac2g02867 Beta vulgaris
Eucgr.G03259 Eucalyptus grandis
FAN01G0470 Fragaria x ananassa
FAN01G1245 Fragaria x ananassa
FAN03G3505 Fragaria x ananassa
FAN06G2455 Fragaria x ananassa
FAN10G4268 Fragaria x ananassa
FvH4_7g02220 Fragaria vesca
Glyma.11G150100 Glycine max
Gohir.A13G013200 Gossypium hirsutum
Gohir.D13G014300 Gossypium hirsutum
Gorai.013G015500 Gossypium raimondii
GSVIVG01000850001 Vitis vinifera
HanXRQChr05g0145061 Helianthus annuus
Haze_03113 Corylus avellana
Haze_26725 Corylus avellana
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla
HPP92_001442 Vanilla planifolia
HPP92_001459 Vanilla planifolia
Hund15708 Selenicereus undatus
Lalb_Chr04g0263911 Lupinus albus
Lalb_Chr04g0263921 Lupinus albus
Lj3g0016020 Lotus japonicus
Lj9A645G77 Lonicera japonica
Lj9A645G78 Lonicera japonica
Lj9A645G79 Lonicera japonica
Lj9C645T11 Lonicera japonica
Lsat_1_v5_gn_9_47141 Lactuca sativa
Manes.04G164000 Manihot esculenta
Mapoly0005s0161 Marchantia polymorpha
MBI17_g24522_MAGBIO Magnolia biondii
MBI17_g33308_MAGBIO Magnolia biondii
MCO01G407 Micromonas commoda
MD02G1296200 Malus domestica
MD07G1077800 Malus domestica
Medtr3g022850 Medicago truncatula
MELO3C012446.2 Cucumis melo
Migut.N01817 Erythranthe guttata
Nitab4.5_0000316g0180 Nicotiana tabacum
Nitab4.5_0006307g0060 Nicotiana tabacum
Nn7g36468 Nelumbo nucifera
Oeu006103.1 Olea europaea
Os01g0948100 Oryza sativa ssp. japonica
Peaxi162Scf00309g00011 Petunia axillaris
Peaxi162Scf00309g00015 Petunia axillaris
Peaxi162Scf00309g00016 Petunia axillaris
PGR031G0610 Punica granatum
Phvul.005G033000 Phaseolus vulgaris
Potri.003G202300 Populus trichocarpa
Pp3c16_12330 Physcomitrium patens
PRCOL_00004679 Prasinoderma coloniale
Prupe.2G028500 Prunus persica
Prupe.2G032400 Prunus persica
Prupe.2G099800 Prunus persica
Prupe.7G020900 Prunus persica
Psat5g213600 Pisum sativum
Psat5g213680 Pisum sativum
PSO135G0630 Papaver somniferum
PSO339G0509 Papaver somniferum
PSO384G2132 Papaver somniferum
PSO782G0837 Papaver somniferum
QL04p013327 Quercus lobata
RcHm_v2.0_Chr1g0319541 Rosa chinensis
RcHm_v2.0_Chr2g0114761 Rosa chinensis
RcHm_v2.0_Chr3g0488831 Rosa chinensis
RcHm_v2.0_Chr4g0391951 Rosa chinensis
RcHm_v2.0_Chr5g0078731 Rosa chinensis
RcHm_v2.0_Chr6g0277201 Rosa chinensis
Rhsim07G0062200 Rhododendron simsii
Sabra03G0149500 Salix brachista
SalBow2G1212 Salvia bowleyana
Sc10g0004230 Simmondsia chinensis
Sc10g0004240 Simmondsia chinensis
Sed0005559 Sechium edule
SEGI_11905 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02935 Striga asiatica
SHI03965 Sapria himalayana
SHI03969 Sapria himalayana
SHI03973 Sapria himalayana
SHI03974 Sapria himalayana
SHI03976 Sapria himalayana
SHI03977 Sapria himalayana
SMO337G0105 Selaginella moellendorffii
Solyc01g068340.3 Solanum lycopersicum
Solyc01g068350.3 Solanum lycopersicum
Sopen01g030310 Solanum pennellii
Sp5g22360 Schrenkiella parvula
Sp5g22380 Schrenkiella parvula
Sp6g04870 Schrenkiella parvula
TAR636G1724 Trochodendron aralioides
THA.LOC104819120 Tarenaya hassleriana
Thecc.10G005400 Theobroma cacao
Thhalv10024629m.g Eutrema salsugineum
Thhalv10024809m.g Eutrema salsugineum
TPR.G18800 Trifolium pratense
TWI15G1108 Tripterygium wilfordii
unitig_744.g24021 Utricularia gibba
vmacro13722 Vaccinium macrocarpon
vmacro13723 Vaccinium macrocarpon
vmacro13724 Vaccinium macrocarpon
VMungo1080G1012 Vigna mungo
Zm00001eb141330 Zea mays
Zm00001eb141350 Zea mays

User provided reference genes

Program Settings