Gene: Sopen01g030310

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g030310
  • Transcript Identifier Sopen01g030310.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 87535306-87549443 : positive

Gene Family Information

  • ID HOM05D004944
  • #Genes/#Species 150/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g030310.1

Descriptions

  • Description Encodes an Arabidopsis homolog of the endonuclease MSU81. T-DNA insertion lines of AtMSU81 have a deficiency in homologous recombination in somatic cells but only after genotoxic stress. Crosses with a hyperrecombinogenic mutant of the AtRecQ4A helicase resulted in synthetic lethality in the double mutant. | MMS AND UV SENSITIVE 81 (MUS81) | CONTAINS InterPro DOMAIN/s: ERCC4 domain , Helix-hairpin-helix DNA-binding motif, class 1 , Restriction endonuclease, type II-like | BEST Arabidopsis thaliana protein match is: Restriction endonuclease, type II-like superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000737
IEA
InterProDNA catabolic process, endonucleolytic
GO:0006302
IEA
InterProdouble-strand break repair
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT4G30870
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT4G30870
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT4G30870
GO:0000723
ISO
PLAZA Integrative Orthologytelomere maintenance AT4G30870
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT4G30870
GO:0007129
ISO
PLAZA Integrative Orthologyhomologous chromosome pairing at meiosis AT4G30870
GO:0006312
ISO
PLAZA Integrative Orthologymitotic recombination AT4G30870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0004518
IEA
InterPronuclease activity
GO:0008821
IEA
InterProcrossover junction endodeoxyribonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000794
ISO
PLAZA Integrative Orthologycondensed nuclear chromosome AT4G30870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011335 Restriction endonuclease type II-like
IPR006166 ERCC4 domain
IPR033309 Crossover junction endonuclease Mus81
IPR042530 EME1/EME2, C-terminal domain
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
13.3.5.5.2.1.1.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.component MUS81