Gene: Solyc01g068340.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g068340.3
- Transcript Identifier Solyc01g068340.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 70348186-70357441 : positive
Gene Family Information
- ID HOM05D004944
- #Genes/#Species 150/97
- Phylogenetic origin
- ID ORTHO05D005989
- #Genes/#Species 149/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc01g068340.3.1
- uniprot A0A3Q7F0C1
- gene_id Solyc01g068340
Descriptions
- Description Crossover junction endonuclease MUS81 (AHRD V3.3 *** A0A2G3AKQ4_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031573 | IBA | GOA Database | mitotic intra-S DNA damage checkpoint signaling | |
| GO:0006312 | ISO | PLAZA Integrative Orthology | mitotic recombination | AT4G30870 |
| GO:0007129 | ISO | PLAZA Integrative Orthology | homologous chromosome pairing at meiosis | AT4G30870 |
| GO:0006974 | ISO | PLAZA Integrative Orthology | cellular response to DNA damage stimulus | AT4G30870 |
| GO:0000723 | ISO | PLAZA Integrative Orthology | telomere maintenance | AT4G30870 |
| GO:0000724 | ISO | PLAZA Integrative Orthology | double-strand break repair via homologous recombination | AT4G30870 |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT4G30870 |
| GO:0051026 | ISO | PLAZA Integrative Orthology | chiasma assembly | AT4G30870 |
| GO:0000727 | IBA | GOA Database | double-strand break repair via break-induced replication | |
| GO:0000712 | IBA | GOA Database | resolution of meiotic recombination intermediates | |
| GO:0000737 | IEA | GOA Database | DNA catabolic process, endonucleolytic | |
| GO:0000737 | IEA | InterPro | DNA catabolic process, endonucleolytic | |
| GO:0006302 | IEA | GOA Database | double-strand break repair | |
| GO:0006302 | IEA | InterPro | double-strand break repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0048257 | IBA | GOA Database | 3'-flap endonuclease activity | |
| GO:0008821 | IEA | GOA Database | crossover junction endodeoxyribonuclease activity | |
| GO:0008821 | IEA | InterPro | crossover junction endodeoxyribonuclease activity | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004518 | IEA | InterPro | nuclease activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000794 | ISO | PLAZA Integrative Orthology | condensed nuclear chromosome | AT4G30870 |
| GO:0005634 | IBA | GOA Database | nucleus | |
| GO:0048476 | IBA | GOA Database | Holliday junction resolvase complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.3.5.5.2.1.1.1 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.component MUS81 |