Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p23720 Brassica napus
Aa31LG6G8790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.534 Anthoceros agrestis
Ah.04g162840 Amaranthus hybridus
AL1G50380 Arabidopsis lyrata
AL1G60360 Arabidopsis lyrata
Aqoxy4G02415 Aquilegia oxysepala
Aqoxy4G02416 Aquilegia oxysepala
Aqoxy6G00145 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Z9JWZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CA6GZM Arachis hypogaea
AT1G35530 Arabidopsis thaliana
AT1G36020 Arabidopsis thaliana
ATR0749G100 Amborella trichopoda
Atru.chr13.2408 Acer truncatum
Atru.chr13.2409 Acer truncatum
AUR62004624 Chenopodium quinoa
AUR62023519 Chenopodium quinoa
BcaB03g13661 Brassica carinata
BcaC05g27729 Brassica carinata
BolC5t32466H Brassica oleracea
BraA05t21240Z Brassica rapa
C02p24690 Brassica napus
C05p37130 Brassica napus
CAN.G259.2 Capsicum annuum
CANSAT56G0037 Cannabis sativa
CARHR034280 Cardamine hirsuta
Carub.0001s3315 Capsella rubella
Ca_19714_v3 Cicer arietinum L.
Cc00_g06540 Coffea canephora
CDE04G3479 Ceratophyllum demersum
Cfa008133 Carpinus fangiana
Ciclev10000033m.g Citrus clementina
CiPaw.03G019200 Carya illinoinensis
CiPaw.03G019300 Carya illinoinensis
ClCG11G008660 Citrullus lanatus
ClCG11G008680 Citrullus lanatus
ClCG11G008690 Citrullus lanatus
COL.COLO4_12801 Corchorus olitorius
Cpa.g.sc66.23 Carica papaya
Cpa.g.sc66.25 Carica papaya
Cre03.g208833 Chlamydomonas reinhardtii
CsaV3_2G033030 Cucumis sativus L.
CSS0009856 Camellia sinensis var. sinensis
CSS0042276 Camellia sinensis var. sinensis
DCAR_011526 Daucus carota
Dinv02586 Davidia involucrata
Dinv02587 Davidia involucrata
Duzib177G0087 Durio zibethinus
Duzib177G1004 Durio zibethinus
ECA233G3640 Erigeron canadensis
EL10Ac1g00109 Beta vulgaris
Eucgr.F02585 Eucalyptus grandis
FAN01G2229 Fragaria x ananassa
FAN03G2849 Fragaria x ananassa
FAN03G3444 Fragaria x ananassa
FAN06G0910 Fragaria x ananassa
FAN10G2375 Fragaria x ananassa
FAN18G0186 Fragaria x ananassa
FvH4_7g03750 Fragaria vesca
FvH4_7g05830 Fragaria vesca
Glyma.08G238200 Glycine max
Gohir.A13G120700 Gossypium hirsutum
Gohir.D13G124700 Gossypium hirsutum
Gorai.013G139300 Gossypium raimondii
GSVIVG01012489001 Vitis vinifera
GSVIVG01034779001 Vitis vinifera
HanXRQChr17g0559191 Helianthus annuus
Haze_13904 Corylus avellana
Haze_26138 Corylus avellana
Hma1.2p1_0503F.1_g168030 Hydrangea macrophylla
HPP92_004437 Vanilla planifolia
HPP92_004438 Vanilla planifolia
Hund16786 Selenicereus undatus
Lalb_Chr01g0000031 Lupinus albus
Lj3g0009157 Lotus japonicus
Lj7C288T6 Lonicera japonica
Lsat_1_v5_gn_3_21180 Lactuca sativa
Lsat_1_v5_gn_8_141780 Lactuca sativa
Manes.18G103400 Manihot esculenta
Mapoly0001s0472 Marchantia polymorpha
MBI12_g15164_MAGBIO Magnolia biondii
MBI17_g21472_MAGBIO Magnolia biondii
MBI17_g38773_MAGBIO Magnolia biondii
MBI17_g46832_MAGBIO Magnolia biondii
MBI17_g46833_MAGBIO Magnolia biondii
MCO11G659 Micromonas commoda
MD15G1404400 Malus domestica
Medtr1g097740 Medicago truncatula
Medtr1g103260 Medicago truncatula
Medtr8g038430 Medicago truncatula
MELO3C008073.2 Cucumis melo
Migut.C01287 Erythranthe guttata
MSTRG.1544 Avicennia marina
Nitab4.5_0000167g0270 Nicotiana tabacum
Nitab4.5_0000167g0280 Nicotiana tabacum
Nitab4.5_0000167g0300 Nicotiana tabacum
Nitab4.5_0003010g0040 Nicotiana tabacum
Nitab4.5_0003010g0050 Nicotiana tabacum
Nitab4.5_0003010g0060 Nicotiana tabacum
Nn5g27609 Nelumbo nucifera
Oeu021225.1 Olea europaea
Os11g0180600 Oryza sativa ssp. japonica
Peaxi162Scf00391g00530 Petunia axillaris
Peaxi162Scf00391g00531 Petunia axillaris
Peaxi162Scf00391g00532 Petunia axillaris
PGR042G2824 Punica granatum
Phvul.011G000500 Phaseolus vulgaris
Potri.013G109600 Populus trichocarpa
Potri.013G110200 Populus trichocarpa
Pp3c20_9530 Physcomitrium patens
PRCOL_00002915 Prasinoderma coloniale
Prupe.1G551100 Prunus persica
Prupe.2G019600 Prunus persica
Prupe.2G019700 Prunus persica
Psat0s1585g0040 Pisum sativum
Psat4g066240 Pisum sativum
Psat5g126920 Pisum sativum
PSO170G4536 Papaver somniferum
PSO782G5557 Papaver somniferum
QL09p004928 Quercus lobata
RcHm_v2.0_Chr7g0228871 Rosa chinensis
RcHm_v2.0_Chr7g0228881 Rosa chinensis
Rhsim11G0056100 Rhododendron simsii
Rhsim11G0056200 Rhododendron simsii
Sabra13G0094500 Salix brachista
SalBow7G4726 Salvia bowleyana
Sc23g0001370 Simmondsia chinensis
Sc23g0001380 Simmondsia chinensis
Sed0000511 Sechium edule
SEGI_09674 Sequoiadendron giganteum
SEGI_29563 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10583 Striga asiatica
SHI09022 Sapria himalayana
Solyc11g020760.3 Solanum lycopersicum
Solyc11g020770.3 Solanum lycopersicum
Sopen11g010870 Solanum pennellii
Sp1g30300 Schrenkiella parvula
TAR628G1246 Trochodendron aralioides
THA.LOC104816395 Tarenaya hassleriana
Thecc.08G186400 Theobroma cacao
Thhalv10001810m.g Eutrema salsugineum
Thhalv10002370m.g Eutrema salsugineum
TPR.G26106 Trifolium pratense
unitig_747.g21475 Utricularia gibba
vmacro00754 Vaccinium macrocarpon
vmacro00755 Vaccinium macrocarpon
VMungo1127G0411 Vigna mungo
VMungo1127G1203 Vigna mungo
Zm00001eb201140 Zea mays
Zm00001eb384980 Zea mays

User provided reference genes

Program Settings