Gene: Cc00_g06540

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc00_g06540
  • Transcript Identifier Cc00_g06540.1
  • Gene Type Coding gene
  • Location chr0 : 51776912-51792307 : negative

Gene Family Information

  • ID HOM05D004901
  • #Genes/#Species 151/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q2HG76
  • UniProtKB F4HYE5
  • UniProtKB Q8IYD8
  • UniProtKB D7KLV5
  • UniProtKB Q8BGE5
  • UniProtKB F4HYE4
  • id GSCOCG00005829001

Descriptions

  • Description Putative DEAD/DEAH box RNA helicase family protein 
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT1G35530
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT1G35530
GO:0045128
ISO
PLAZA Integrative Orthologynegative regulation of reciprocal meiotic recombination AT1G35530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
InterProATP binding
GO:0016787
IEA
InterProhydrolase activity
GO:0043138
IEA
InterPro3'-5' DNA helicase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR006935 Helicase/UvrB, N-terminal
IPR044749 FANCM, DEAH-box helicase domain
IPR039686 FANCM/Mph1-like
Mapman id Description
13.3.5.5.4.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.FANCM-MHF DNA remodeling complex.DNA translocase component FANCM