Gene: Sopen11g010870

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g010870
  • Transcript Identifier Sopen11g010870.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 12618342-12649870 : negative

Gene Family Information

  • ID HOM05D004901
  • #Genes/#Species 151/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g010870.1

Descriptions

  • Description DEAD/DEAH box RNA helicase family protein | FUNCTIONS IN: in 6 functions | LOCATED IN: cellular_component unknown | EXPRESSED IN: 17 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: unknown protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT1G35530
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT1G35530
GO:0045128
ISO
PLAZA Integrative Orthologynegative regulation of reciprocal meiotic recombination AT1G35530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043138
IEA
InterPro3'-5' DNA helicase activity
GO:0005524
IEA
InterProATP binding
GO:0003677
IEA
InterProDNA binding
GO:0016787
IEA
InterProhydrolase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR039686 FANCM/Mph1-like
IPR044749 FANCM, DEAH-box helicase domain
IPR001650 Helicase, C-terminal
IPR006935 Helicase/UvrB, N-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
13.3.5.5.4.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.FANCM-MHF DNA remodeling complex.DNA translocase component FANCM