Gene: PGR042G2824

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR042G2824
  • Transcript Identifier PGR042G2824.01
  • Gene Type Coding gene
  • Location NC_045130.1 : 13621138-13630529 : negative

Gene Family Information

  • ID HOM05D004901
  • #Genes/#Species 151/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031394995.1
  • name LOC116206304
  • name XM_031539135.1
  • id gene-LOC116206304
  • uniprot A0A6P8DEK6

Descriptions

  • product DEAD-box ATP-dependent RNA helicase FANCM
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT1G35530
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT1G35530
GO:0045128
ISO
PLAZA Integrative Orthologynegative regulation of reciprocal meiotic recombination AT1G35530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IEA
InterProhydrolase activity
GO:0043138
IEA
GOA Database3'-5' DNA helicase activity
GO:0043138
IEA
InterPro3'-5' DNA helicase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0004386
IEA
GOA Databasehelicase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR006935 Helicase/UvrB, N-terminal
IPR039686 FANCM/Mph1-like
IPR044749 FANCM, DEAH-box helicase domain
Mapman id Description
13.3.5.5.4.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.FANCM-MHF DNA remodeling complex.DNA translocase component FANCM