Gene: Solyc11g020760.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g020760.3
  • Transcript Identifier Solyc11g020760.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 12042807-12054148 : positive

Gene Family Information

  • ID HOM05D004901
  • #Genes/#Species 151/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g020760.3.1
  • uniprot A0A3Q7IU31
  • gene_id Solyc11g020760

Descriptions

  • Description DEAD/DEAH box RNA helicase family protein (AHRD V3.3 *-* A0A1P8APH5_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0036297
IBA
GOA Databaseinterstrand cross-link repair
GO:0045128
ISO
PLAZA Integrative Orthologynegative regulation of reciprocal meiotic recombination AT1G35530
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT1G35530
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT1G35530
GO:0045003
IBA
GOA Databasedouble-strand break repair via synthesis-dependent strand annealing
GO:0071932
IBA
GOA Databasereplication fork reversal
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000400
IBA
GOA Databasefour-way junction DNA binding
GO:0043138
IBA
IEA
GOA Database3'-5' DNA helicase activity
GO:0043138
IEA
InterPro3'-5' DNA helicase activity
GO:0009378
IBA
GOA Databasefour-way junction helicase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003677
IEA
GOA DatabaseDNA binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR039686 FANCM/Mph1-like
Mapman id Description
13.3.5.5.4.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.FANCM-MHF DNA remodeling complex.DNA translocase component FANCM