Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p17460 Brassica napus
A05p01610 Brassica napus
A10p14110 Brassica napus
Aa31LG2G21230 Aethionema arabicum
Aa31LG3G12720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4075 Anthoceros agrestis
Actinidia25266 Actinidia chinensis
Ah.14g085380 Amaranthus hybridus
AL7G26800 Arabidopsis lyrata
AL8G32610 Arabidopsis lyrata
AL8G32620 Arabidopsis lyrata
Aqoxy5G03492 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6Q96ZG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LLR3FQ Arachis hypogaea
AT4G26170 Arabidopsis thaliana
AT5G56770 Arabidopsis thaliana
AT5G56780 Arabidopsis thaliana
ATR0705G152 Amborella trichopoda
Atru.chr7.1554 Acer truncatum
Atru.chr7.1555 Acer truncatum
Atru.chr7.1561 Acer truncatum
AUR62027409 Chenopodium quinoa
AUR62031324 Chenopodium quinoa
BcaB08g36059 Brassica carinata
BcaC02g12506 Brassica carinata
BcaC02g12705 Brassica carinata
BcaC04g20054 Brassica carinata
BcaC09g50676 Brassica carinata
BcaNung02444 Brassica carinata
BolC9t57684H Brassica oleracea
BraA01t01701Z Brassica rapa
BraA05t19155Z Brassica rapa
BraA05t19157Z Brassica rapa
BraA10t43502Z Brassica rapa
C01p21980 Brassica napus
C04p01820 Brassica napus
C09p48340 Brassica napus
CANSAT56G0950 Cannabis sativa
CANSAT56G3488 Cannabis sativa
CARHR233700 Cardamine hirsuta
CARHR270520 Cardamine hirsuta
CARHR270530 Cardamine hirsuta
Carub.0007s1478 Capsella rubella
Carub.0008s1725 Capsella rubella
Carub.0008s1726 Capsella rubella
Ca_08398_v3 Cicer arietinum L.
CBR_g29538 Chara braunii
Cc06_g11170 Coffea canephora
CDE09G0006 Ceratophyllum demersum
Cfa003108 Carpinus fangiana
Ciclev10008074m.g Citrus clementina
Ciclev10010615m.g Citrus clementina
CiPaw.03G218000 Carya illinoinensis
ClCG03G015750 Citrullus lanatus
COL.COLO4_18221 Corchorus olitorius
Cpa.g.sc7.238 Carica papaya
CsaV3_1G040260 Cucumis sativus L.
CsaV3_UNG066510 Cucumis sativus L.
CSS0023607 Camellia sinensis var. sinensis
CSS0050052 Camellia sinensis var. sinensis
DCAR_024685 Daucus carota
Dinv36750 Davidia involucrata
Dinv42301 Davidia involucrata
Duzib150G0429 Durio zibethinus
Duzib168G0645 Durio zibethinus
ECA234G2909 Erigeron canadensis
EL10Ac8g19309 Beta vulgaris
Eucgr.C00913 Eucalyptus grandis
FAN19G1271 Fragaria x ananassa
FAN23G3053 Fragaria x ananassa
FAN26G0987 Fragaria x ananassa
FAN26G2794 Fragaria x ananassa
FvH4_1g07150 Fragaria vesca
FvH4_1g07151 Fragaria vesca
FvH4_1g07231 Fragaria vesca
Glyma.01G003300 Glycine max
Glyma.07G128700 Glycine max
Gohir.A08G244900 Gossypium hirsutum
Gohir.A08G245000 Gossypium hirsutum
Gohir.A08G245100 Gossypium hirsutum
Gohir.D08G265800 Gossypium hirsutum
Gohir.D08G265900 Gossypium hirsutum
Gohir.D08G266000 Gossypium hirsutum
Gorai.N024000 Gossypium raimondii
GSVIVG01015227001 Vitis vinifera
HanXRQChr07g0186331 Helianthus annuus
HanXRQChr12g0354731 Helianthus annuus
Haze_25890 Corylus avellana
Hma1.2p1_0024F.1_g016070 Hydrangea macrophylla
Hma1.2p1_0663F.1_g198910 Hydrangea macrophylla
HPP92_006937 Vanilla planifolia
Hund06702 Selenicereus undatus
Lalb_Chr24g0393831 Lupinus albus
Lj2g0008301 Lotus japonicus
Lsat_1_v5_gn_5_145680 Lactuca sativa
Manes.03G032000 Manihot esculenta
Mapoly0070s0093 Marchantia polymorpha
MBI08_g34934_MAGBIO Magnolia biondii
MD02G1075500 Malus domestica
MD02G1076000 Malus domestica
Medtr6g092500 Medicago truncatula
Medtr6g092520 Medicago truncatula
Medtr7g090060 Medicago truncatula
MELO3C015453.2 Cucumis melo
Migut.J00591 Erythranthe guttata
Nitab4.5_0000713g0030 Nicotiana tabacum
Nitab4.5_0000938g0020 Nicotiana tabacum
Nitab4.5_0004087g0010 Nicotiana tabacum
Nn8g38906 Nelumbo nucifera
Oeu024590.1 Olea europaea
Os07g0586700 Oryza sativa ssp. japonica
Peaxi162Scf00175g00047 Petunia axillaris
PGR142G4073 Punica granatum
PGSC0003DMG400033614 Solanum tuberosum
Phvul.004G171600 Phaseolus vulgaris
Potri.006G150000 Populus trichocarpa
Pp3c15_21310 Physcomitrium patens
Pp3c16_1200 Physcomitrium patens
Pp3c27_3080 Physcomitrium patens
Pp3c3_34250 Physcomitrium patens
Pp3c4_9790 Physcomitrium patens
Pp3c5_7060 Physcomitrium patens
Pp3c9_23170 Physcomitrium patens
Prupe.7G212600 Prunus persica
Psat1g049640 Pisum sativum
PSO210G3334 Papaver somniferum
PSO210G5509 Papaver somniferum
QL02p063021 Quercus lobata
RcHm_v2.0_Chr2g0093031 Rosa chinensis
RcHm_v2.0_Chr2g0093041 Rosa chinensis
Rhsim03G0233500 Rhododendron simsii
Rhsim03G0233900 Rhododendron simsii
Rhsim05G0022900 Rhododendron simsii
Rhsim05G0023200 Rhododendron simsii
RhsimUnG0032400 Rhododendron simsii
RhsimUnG0144800 Rhododendron simsii
RhsimUnG0145000 Rhododendron simsii
RhsimUnG0189000 Rhododendron simsii
Sabra06G0118700 Salix brachista
SalBow1G6253 Salvia bowleyana
SalBow6G4094 Salvia bowleyana
Sc18g0001910 Simmondsia chinensis
Sed0012121 Sechium edule
SGA_v2.0_scaffold62G21589 Striga asiatica
Solyc07g021550.3 Solanum lycopersicum
Sopen07g011050 Solanum pennellii
Sp6g18520 Schrenkiella parvula
Sp7g24190 Schrenkiella parvula
THA.LOC104813490 Tarenaya hassleriana
Thecc.09G092200 Theobroma cacao
Thhalv10015325m.g Eutrema salsugineum
Thhalv10025245m.g Eutrema salsugineum
TPR.G35500 Trifolium pratense
TPR.G35590 Trifolium pratense
TPR.G40396 Trifolium pratense
TWI32G1061 Tripterygium wilfordii
unitig_0.g218 Utricularia gibba
vmacro06280 Vaccinium macrocarpon
vmacro17218 Vaccinium macrocarpon
vmacro22686 Vaccinium macrocarpon
Zm00001eb325970 Zea mays

User provided reference genes

Program Settings