Gene: Cc06_g11170
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc06_g11170
- Transcript Identifier Cc06_g11170.1
- Gene Type Coding gene
- Location chr6 : 9015926-9018947 : negative
Gene Family Information
- ID HOM05D004448
- #Genes/#Species 161/89
- Phylogenetic origin
- ID ORTHO05D005919
- #Genes/#Species 150/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB B9RKA5
- UniProtKB B9H8V9
- UniProtKB D7TB99
- id GSCOCG00041690001
Descriptions
- Description Putative effector of transcription2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006306 | ISO | PLAZA Integrative Orthology | DNA methylation | AT4G26170 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT5G56780 |
| GO:2000033 | ISO | PLAZA Integrative Orthology | regulation of seed dormancy process | AT5G56780 |
| GO:0010089 | ISO | PLAZA Integrative Orthology | xylem development | AT5G56780 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0097100 | ISO | PLAZA Integrative Orthology | supercoiled DNA binding | AT5G56780 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G26170 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G26170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR038909 | Protein effector of transcription |
| Mapman id | Description |
|---|---|
| 15.5.40 | RNA biosynthesis.transcriptional regulation.transcription factor (HRT) |