Gene: vmacro06280

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro06280
  • Transcript Identifier vmacro06280-RA
  • Gene Type Coding gene
  • Location chr2_Vaccinium_macrocarpon_Stevens_v1 : 4316837-4319289 : negative

Gene Family Information

  • ID HOM05D004448
  • #Genes/#Species 161/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro06280_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to ET2: Protein EFFECTOR OF TRANSCRIPTION 2 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006306
ISO
PLAZA Integrative OrthologyDNA methylation AT5G56780
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G56780
GO:2000033
ISO
PLAZA Integrative Orthologyregulation of seed dormancy process AT5G56780
GO:0010089
ISO
PLAZA Integrative Orthologyxylem development AT5G56780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0097100
ISO
PLAZA Integrative Orthologysupercoiled DNA binding AT5G56780

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G56780
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G56770

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038909 Protein effector of transcription
Mapman id Description
15.5.40 RNA biosynthesis.transcriptional regulation.transcription factor (HRT)