Gene: AT4G26170
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G26170
- Transcript Identifier AT4G26170.1
- Gene Type Coding gene
- Location Chr4 : 13256930-13259382 : positive
Gene Family Information
- ID HOM05D004448
- #Genes/#Species 161/89
- Phylogenetic origin
- ID ORTHO05D015948
- #Genes/#Species 11/9
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G26170.1
- uniprot F4JU69
Descriptions
- Description transcription factor
- Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: effector of transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006306 | IGI | Gene Ontology | DNA methylation | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IDA | Gene Ontology | DNA binding | 2 |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA | Gene Ontology | nucleus | 3 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR038909 | Protein effector of transcription |
| Mapman id | Description |
|---|---|
| 15.5.40 | RNA biosynthesis.transcriptional regulation.transcription factor (HRT) |