Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06600 Brassica napus
A05p24870 Brassica napus
A07p37870 Brassica napus
Aa31LG4G8910 Aethionema arabicum
Actinidia15613 Actinidia chinensis
Actinidia17768 Actinidia chinensis
Ah.05g169010 Amaranthus hybridus
AL2G31290 Arabidopsis lyrata
Aqoxy5G02018 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.64NVCN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9T1T9I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GMAE2R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J67SBC Arachis hypogaea
AT1G71720 Arabidopsis thaliana
ATR0006G031 Amborella trichopoda
Atru.chr13.1991 Acer truncatum
AUR62007692 Chenopodium quinoa
AUR62007694 Chenopodium quinoa
AUR62013449 Chenopodium quinoa
BcaB01g01306 Brassica carinata
BcaB02g06626 Brassica carinata
BcaB03g14063 Brassica carinata
BcaB03g16420 Brassica carinata
BcaB04g19483 Brassica carinata
BcaB05g22179 Brassica carinata
BcaB07g33352 Brassica carinata
BcaB08g35329 Brassica carinata
BcaC01g01120 Brassica carinata
BcaC01g03158 Brassica carinata
BcaC03g15852 Brassica carinata
BcaC05g26824 Brassica carinata
BcaC05g28762 Brassica carinata
BcaC08g46598 Brassica carinata
BolC1t02895H Brassica oleracea
BolC3t15257H Brassica oleracea
BolC5t31416H Brassica oleracea
BolC6t35755H Brassica oleracea
BolC6t39629H Brassica oleracea
BraA05t21374Z Brassica rapa
BraA07t31352Z Brassica rapa
C01p29530 Brassica napus
C03p12860 Brassica napus
C03p29020 Brassica napus
C03p88340 Brassica napus
C05p26970 Brassica napus
C06p45770 Brassica napus
CAN.G1183.17 Capsicum annuum
CARHR291070 Cardamine hirsuta
Carub.0002s1848 Capsella rubella
Ca_04667_v3 Cicer arietinum L.
Ca_10656_v3 Cicer arietinum L.
CBR_g1014 Chara braunii
CBR_g39723 Chara braunii
Cc10_g06490 Coffea canephora
CDE02G3532 Ceratophyllum demersum
Cfa018276 Carpinus fangiana
Ciclev10000894m.g Citrus clementina
CiPaw.15G011900 Carya illinoinensis
ClCG08G007280 Citrullus lanatus
COL.COLO4_13726 Corchorus olitorius
Cpa.g.sc26.112 Carica papaya
CsaV3_6G004950 Cucumis sativus L.
CSS0010963 Camellia sinensis var. sinensis
CSS0011525 Camellia sinensis var. sinensis
DCAR_001192 Daucus carota
DCAR_014325 Daucus carota
Duzib093G0931 Durio zibethinus
ECA232G4000 Erigeron canadensis
ECA232G4004 Erigeron canadensis
EL10Ac1g01372 Beta vulgaris
Eucgr.F02682 Eucalyptus grandis
FAN15G1954 Fragaria x ananassa
FAN20G2288 Fragaria x ananassa
FAN24G2283 Fragaria x ananassa
FAN27G1841 Fragaria x ananassa
FvH4_2g12900 Fragaria vesca
Glyma.10G220900 Glycine max
Glyma.16G161600 Glycine max
Glyma.20G170600 Glycine max
Gohir.A02G062300 Gossypium hirsutum
Gohir.D02G068000 Gossypium hirsutum
Gorai.005G076800 Gossypium raimondii
GSVIVG01013706001 Vitis vinifera
HanXRQChr11g0320171 Helianthus annuus
Haze_17811 Corylus avellana
Hma1.2p1_0678F.1_g202100 Hydrangea macrophylla
HPP92_022923 Vanilla planifolia
HPP92_022935 Vanilla planifolia
HPP92_022936 Vanilla planifolia
HPP92_022945 Vanilla planifolia
Hund17360 Selenicereus undatus
Lalb_Chr01g0009831 Lupinus albus
Lalb_Chr06g0161781 Lupinus albus
Lalb_Chr19g0130031 Lupinus albus
Lj2g0007374 Lotus japonicus
Lj5g0021674 Lotus japonicus
Lj7A385T59 Lonicera japonica
Lsat_1_v5_gn_9_42380 Lactuca sativa
Manes.02G184000 Manihot esculenta
Mapoly0036s0031 Marchantia polymorpha
MBI01_g29006_MAGBIO Magnolia biondii
MD05G1034600 Malus domestica
MD10G1036900 Malus domestica
MD10G1037300 Malus domestica
Medtr1g097610 Medicago truncatula
MELO3C019971.2 Cucumis melo
Migut.C00138 Erythranthe guttata
Migut.C00150 Erythranthe guttata
MSTRG.972 Avicennia marina
Nitab4.5_0003178g0010 Nicotiana tabacum
Nitab4.5_0003443g0070 Nicotiana tabacum
Nn6g32191 Nelumbo nucifera
Oeu046065.1 Olea europaea
Oeu061448.2 Olea europaea
Os01g0589000 Oryza sativa ssp. japonica
Os05g0535800 Oryza sativa ssp. japonica
Peaxi162Scf00360g00089 Petunia axillaris
PGR102G1394 Punica granatum
PGSC0003DMG400025077 Solanum tuberosum
Phvul.004G089600 Phaseolus vulgaris
Phvul.007G084200 Phaseolus vulgaris
Potri.002G063400 Populus trichocarpa
Potri.005G197900 Populus trichocarpa
Pp3c14_19380 Physcomitrium patens
Pp3c18_13010 Physcomitrium patens
Pp3c19_21190 Physcomitrium patens
Prupe.8G042900 Prunus persica
Psat6g190160 Pisum sativum
PSO170G0918 Papaver somniferum
PSO210G1911 Papaver somniferum
QL02p037179 Quercus lobata
QL03p014334 Quercus lobata
QL03p015133 Quercus lobata
QL04p091948 Quercus lobata
RcHm_v2.0_Chr6g0274001 Rosa chinensis
Rhsim11G0088600 Rhododendron simsii
Sabra05G0150700 Salix brachista
SalBow7G3651 Salvia bowleyana
Sc26g0002880 Simmondsia chinensis
Sed0006049 Sechium edule
Sed0020223 Sechium edule
SEGI_19954 Sequoiadendron giganteum
SEGI_21205 Sequoiadendron giganteum
SEGI_25822 Sequoiadendron giganteum
SGA_v2.0_scaffold133G34677 Striga asiatica
Solyc04g072036.1 Solanum lycopersicum
Sopen04g028080 Solanum pennellii
Sp5g26750 Schrenkiella parvula
TAR628G0201 Trochodendron aralioides
THA.LOC104810492 Tarenaya hassleriana
Thecc.08G161900 Theobroma cacao
Thhalv10018428m.g Eutrema salsugineum
TPR.G17013 Trifolium pratense
TPR.G31491 Trifolium pratense
TWI60G0364 Tripterygium wilfordii
TWI60G0965 Tripterygium wilfordii
unitig_37.g13122 Utricularia gibba
vmacro01503 Vaccinium macrocarpon
VMungo0464G1137 Vigna mungo
VMungo0720G3015 Vigna mungo
Zm00001eb160710 Zea mays
Zm00001eb294080 Zea mays

User provided reference genes

Program Settings