Gene: Cc10_g06490

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc10_g06490
  • Transcript Identifier Cc10_g06490.1
  • Gene Type Coding gene
  • Location chr10 : 5319076-5325532 : negative

Gene Family Information

  • ID HOM05D004425
  • #Genes/#Species 162/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB F6HJE6
  • UniProtKB I1LDC3
  • UniProtKB P46228
  • UniProtKB P73530
  • UniProtKB P29344
  • UniProtKB B9SM67
  • id GSCOCG00034648001

Descriptions

  • Description Putative 30S ribosomal protein S1 homolog A
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010196
ISO
PLAZA Integrative Orthologynonphotochemical quenching AT1G71720
GO:0045727
ISO
PLAZA Integrative Orthologypositive regulation of translation AT1G71720
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT1G71720
GO:0043489
ISO
PLAZA Integrative OrthologyRNA stabilization AT1G71720
GO:0009657
ISO
PLAZA Integrative Orthologyplastid organization AT1G71720
GO:0032544
ISO
PLAZA Integrative Orthologyplastid translation AT1G71720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G71720
GO:0034336
ISO
PLAZA Integrative Orthologymisfolded RNA binding AT1G71720
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G71720

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G71720
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT1G71720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022967 RNA-binding domain, S1
IPR003029 S1 domain
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
16.11.5.1 RNA processing.organelle machinery.post-transcriptional gene expression regulation.plastidial mRNA chaperone (RLSB/BSF)