Gene: Pp3c14_19380

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c14_19380
  • Transcript Identifier Pp3c14_19380V3.3
  • Gene Type Coding gene
  • Location Chr14 : 12789336-12792746 : negative

Gene Family Information

  • ID HOM05D004425
  • #Genes/#Species 162/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c14_19380V3.3
  • pacid 32962233
  • alias Pp1s34_79V6
  • alias Phpat.014G073500
  • alias Phypa_161558
  • uniprot A0A2K1JID8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032544
ISO
PLAZA Integrative Orthologyplastid translation AT1G71720
GO:0009657
ISO
PLAZA Integrative Orthologyplastid organization AT1G71720
GO:0043489
ISO
PLAZA Integrative OrthologyRNA stabilization AT1G71720
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT1G71720
GO:0045727
ISO
PLAZA Integrative Orthologypositive regulation of translation AT1G71720
GO:0010196
ISO
PLAZA Integrative Orthologynonphotochemical quenching AT1G71720
GO:0006412
IBA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034336
ISO
PLAZA Integrative Orthologymisfolded RNA binding AT1G71720
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G71720
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0003735
IBA
GOA Databasestructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G71720
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT1G71720
GO:0009570
IBA
GOA Databasechloroplast stroma
GO:0022627
IBA
GOA Databasecytosolic small ribosomal subunit

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003029 S1 domain
IPR012340 Nucleic acid-binding, OB-fold
IPR022967 RNA-binding domain, S1
Mapman id Description
16.11.5.1 RNA processing.organelle machinery.post-transcriptional gene expression regulation.plastidial mRNA chaperone (RLSB/BSF)