Gene: vmacro01503

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro01503
  • Transcript Identifier vmacro01503-RA
  • Gene Type Coding gene
  • Location chr1_Vaccinium_macrocarpon_Stevens_v1 : 12511244-12518180 : negative

Gene Family Information

  • ID HOM05D004425
  • #Genes/#Species 162/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro01503_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to PDE338: Protein PIGMENT DEFECTIVE 338, chloroplastic (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010196
ISO
PLAZA Integrative Orthologynonphotochemical quenching AT1G71720
GO:0045727
ISO
PLAZA Integrative Orthologypositive regulation of translation AT1G71720
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT1G71720
GO:0043489
ISO
PLAZA Integrative OrthologyRNA stabilization AT1G71720
GO:0009657
ISO
PLAZA Integrative Orthologyplastid organization AT1G71720
GO:0032544
ISO
PLAZA Integrative Orthologyplastid translation AT1G71720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
ISO
PLAZA Homology (enrichment)nucleic acid binding HOM05D004425
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G71720
GO:0034336
ISO
PLAZA Integrative Orthologymisfolded RNA binding AT1G71720
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G71720

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G71720
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT1G71720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
Mapman id Description
35.1 not assigned.annotated