Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p17690 Brassica napus
Aa31LG2G10160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3077 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2801 Anthoceros agrestis
Actinidia17236 Actinidia chinensis
Actinidia38546 Actinidia chinensis
Ah.13g076470 Amaranthus hybridus
AL2G16570 Arabidopsis lyrata
Aqoxy2G02875 Aquilegia oxysepala
Aqoxy5G00267 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.02RJAW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QD816I Arachis hypogaea
AT1G60080 Arabidopsis thaliana
ATR0626G351 Amborella trichopoda
Atru.chr1.1097 Acer truncatum
AUR62024448 Chenopodium quinoa
AUR62026038 Chenopodium quinoa
BcaB07g31201 Brassica carinata
BcaC04g22217 Brassica carinata
BcaC09g49432 Brassica carinata
BNapus_Darmor_BZH_scaffold_155p00060 Brassica napus
BolC1t03637H Brassica oleracea
BolC9t55109H Brassica oleracea
BraA09t37397Z Brassica rapa
C01p36790 Brassica napus
C09p22030 Brassica napus
CAN.G1001.5 Capsicum annuum
CAN.G128.9 Capsicum annuum
CAN.G34.11 Capsicum annuum
CANSAT21G1698 Cannabis sativa
CARHR052860 Cardamine hirsuta
Carub.0002s0514 Capsella rubella
Ca_03365_v3 Cicer arietinum L.
CBR_g20981 Chara braunii
CBR_g41407 Chara braunii
Cc06_g17110 Coffea canephora
Cc06_g17120 Coffea canephora
Cc07_g20870 Coffea canephora
CDE04G2438 Ceratophyllum demersum
CDE07G0852 Ceratophyllum demersum
Cfa006454 Carpinus fangiana
Cfa016818 Carpinus fangiana
Ciclev10005512m.g Citrus clementina
CiPaw.09G038200 Carya illinoinensis
ClCG04G000120 Citrullus lanatus
ClCG04G000130 Citrullus lanatus
COL.COLO4_28283 Corchorus olitorius
Cpa.g.sc3.336 Carica papaya
Cre10.g440900 Chlamydomonas reinhardtii
CsaV3_4G011700 Cucumis sativus L.
CSS0001525 Camellia sinensis var. sinensis
CSS0003189 Camellia sinensis var. sinensis
CSS0010572 Camellia sinensis var. sinensis
CSS0024704 Camellia sinensis var. sinensis
CSS0026699 Camellia sinensis var. sinensis
CSS0027602 Camellia sinensis var. sinensis
CSS0046204 Camellia sinensis var. sinensis
DCAR_013603 Daucus carota
Dinv12482 Davidia involucrata
Dinv39602 Davidia involucrata
Duzib093G1767 Durio zibethinus
ECA248G3203 Erigeron canadensis
EL10Ac3g05398 Beta vulgaris
EL10Ac3g07090 Beta vulgaris
Eucgr.A00059 Eucalyptus grandis
Eucgr.A00063 Eucalyptus grandis
Eucgr.A00069 Eucalyptus grandis
Eucgr.A00263 Eucalyptus grandis
Eucgr.A00265 Eucalyptus grandis
Eucgr.A00266 Eucalyptus grandis
Eucgr.A00267 Eucalyptus grandis
FAN02G2904 Fragaria x ananassa
FAN05G1657 Fragaria x ananassa
FAN09G3586 Fragaria x ananassa
FAN14G1242 Fragaria x ananassa
FvH4_6g23810 Fragaria vesca
Glyma.08G246800 Glycine max
Glyma.14G145600 Glycine max
Glyma.18G267600 Glycine max
Gohir.A01G009000 Gossypium hirsutum
Gohir.A02G158900 Gossypium hirsutum
Gohir.D01G008666 Gossypium hirsutum
Gohir.D01G090350 Gossypium hirsutum
Gohir.D01G090600 Gossypium hirsutum
Gohir.D01G090850 Gossypium hirsutum
Gohir.D01G091400 Gossypium hirsutum
Gorai.002G010400 Gossypium raimondii
Gorai.002G116000 Gossypium raimondii
GSVIVG01033276001 Vitis vinifera
HanXRQChr01g0008751 Helianthus annuus
HanXRQChr06g0178491 Helianthus annuus
Haze_01634 Corylus avellana
Haze_19856 Corylus avellana
Hma1.2p1_0953F.1_g241060 Hydrangea macrophylla
HPP92_019752 Vanilla planifolia
Hund05284 Selenicereus undatus
Lalb_Chr01g0017301 Lupinus albus
Lalb_Chr20g0110501 Lupinus albus
Lj4g0008518 Lotus japonicus
Lj6g0019382 Lotus japonicus
Lju124A41T49 Lonicera japonica
Lsat_1_v5_gn_5_161440 Lactuca sativa
Manes.08G050500 Manihot esculenta
Mapoly0071s0030 Marchantia polymorpha
MBI11_g09466_MAGBIO Magnolia biondii
MCO07G362 Micromonas commoda
MD12G1073800 Malus domestica
Medtr1g007060 Medicago truncatula
MELO3C023136.2 Cucumis melo
Migut.K00090 Erythranthe guttata
MSTRG.10813 Avicennia marina
Nitab4.5_0004587g0010 Nicotiana tabacum
Nitab4.5_0005483g0010 Nicotiana tabacum
Nitab4.5_0009442g0010 Nicotiana tabacum
Nn2g15223 Nelumbo nucifera
Nn7g36292 Nelumbo nucifera
Oeu017945.1 Olea europaea
Os11g0311300 Oryza sativa ssp. japonica
Peaxi162Scf00354g00222 Petunia axillaris
PGR142G2016 Punica granatum
PGSC0003DMG400007507 Solanum tuberosum
PGSC0003DMG400023725 Solanum tuberosum
Phvul.011G181200 Phaseolus vulgaris
Potri.006G051200 Populus trichocarpa
Potri.016G055600 Populus trichocarpa
Pp3c19_14820 Physcomitrium patens
Prupe.7G061000 Prunus persica
Psat6g037480 Pisum sativum
PSO170G6628 Papaver somniferum
PSO357G0544 Papaver somniferum
QL02p103266 Quercus lobata
RcHm_v2.0_Chr3g0482341 Rosa chinensis
Rhsim09G0155500 Rhododendron simsii
Sabra06G0035900 Salix brachista
Sc13g0001750 Simmondsia chinensis
Sc13g0001760 Simmondsia chinensis
Sed0012804 Sechium edule
SEGI_11138 Sequoiadendron giganteum
SEGI_27972 Sequoiadendron giganteum
SEGI_29832 Sequoiadendron giganteum
SGA_v2.0_scaffold273G46436 Striga asiatica
SGA_v2.0_scaffold94G28486 Striga asiatica
SMO169G0201 Selaginella moellendorffii
Solyc06g075390.4 Solanum lycopersicum
Solyc10g080130.3 Solanum lycopersicum
Sopen06g031800 Solanum pennellii
Sopen10g030740 Solanum pennellii
Sp2g04520 Schrenkiella parvula
TAR633G2397 Trochodendron aralioides
THA.LOC104823663 Tarenaya hassleriana
Thecc.05G153400 Theobroma cacao
Thhalv10023611m.g Eutrema salsugineum
TPR.G24500 Trifolium pratense
TWI74G1664 Tripterygium wilfordii
TWI77G0383 Tripterygium wilfordii
unitig_46.g18442 Utricularia gibba
unitig_46.g18443 Utricularia gibba
vmacro09074 Vaccinium macrocarpon
VMungo0331G1303 Vigna mungo
Zm00001eb036840 Zea mays
Zm00001eb161840 Zea mays
Zm00001eb175450 Zea mays
Zm00001eb317600 Zea mays

User provided reference genes

Program Settings