Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21300 Brassica napus
A08p12300 Brassica napus
A09p28560 Brassica napus
Aa31LG8G4020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3306 Anthoceros agrestis
Actinidia13364 Actinidia chinensis
Ah.13g072000 Amaranthus hybridus
AL3G29960 Arabidopsis lyrata
AL7G38230 Arabidopsis lyrata
AL7G38770 Arabidopsis lyrata
Aqoxy2G02775 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2XVX11 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.79Y4XM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C4ZZV2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX4EIU Arachis hypogaea
AT3G16980 Arabidopsis thaliana
AT4G16265 Arabidopsis thaliana
ATR0665G356 Amborella trichopoda
Atru.chr4.3028 Acer truncatum
AUR62016130 Chenopodium quinoa
AUR62041403 Chenopodium quinoa
BcaB01g01499 Brassica carinata
BcaB04g18375 Brassica carinata
BcaB08g34342 Brassica carinata
BcaC04g21057 Brassica carinata
BcaC07g37975 Brassica carinata
BcaC09g50324 Brassica carinata
BcaNung00211 Brassica carinata
BolC1t02605H Brassica oleracea
BolC8t48354H Brassica oleracea
BolC9t56454H Brassica oleracea
BraA01t02037Z Brassica rapa
BraA08t33228Z Brassica rapa
BraA09t38417Z Brassica rapa
C09p36150 Brassica napus
CANSAT54G2312 Cannabis sativa
CARHR092230 Cardamine hirsuta
CARHR222650 Cardamine hirsuta
Carub.0003s1673 Capsella rubella
Carub.0007s2525 Capsella rubella
Ca_01870_v3 Cicer arietinum L.
Cc03_g00970 Coffea canephora
CDE02G0371 Ceratophyllum demersum
CDE09G0896 Ceratophyllum demersum
Cfa024902 Carpinus fangiana
Ciclev10006256m.g Citrus clementina
CiPaw.01G139700 Carya illinoinensis
ClCG05G006460 Citrullus lanatus
Cpa.g.sc9.86 Carica papaya
Cre12.g505750 Chlamydomonas reinhardtii
CSS0008168 Camellia sinensis var. sinensis
DCAR_023347 Daucus carota
DCAR_027008 Daucus carota
Dinv15193 Davidia involucrata
Dinv44302 Davidia involucrata
Duzib052G0793 Durio zibethinus
Duzib212G0477 Durio zibethinus
ECA246G3323 Erigeron canadensis
EL10Ac3g05464 Beta vulgaris
Eucgr.H02666 Eucalyptus grandis
Eucgr.H02672 Eucalyptus grandis
FAN07G2773 Fragaria x ananassa
FAN12G1077 Fragaria x ananassa
FAN12G3053 Fragaria x ananassa
FvH4_3g15650 Fragaria vesca
FvH4_4g19480 Fragaria vesca
Glyma.07G241200 Glycine max
Glyma.09G037400 Glycine max
Glyma.15G142700 Glycine max
Gohir.A01G034300 Gossypium hirsutum
Gohir.D01G023535 Gossypium hirsutum
Gorai.002G030000 Gossypium raimondii
GSVIVG01035016001 Vitis vinifera
HanXRQChr05g0145921 Helianthus annuus
Haze_01277 Corylus avellana
Haze_26633 Corylus avellana
Hma1.2p1_0013F.1_g008720 Hydrangea macrophylla
Hma1.2p1_0096F.1_g047650 Hydrangea macrophylla
HPP92_002026 Vanilla planifolia
HPP92_005120 Vanilla planifolia
Hund03115 Selenicereus undatus
Hund11961 Selenicereus undatus
Lalb_Chr08g0234431 Lupinus albus
Lalb_Chr18g0058831 Lupinus albus
Lj4g0028172 Lotus japonicus
Lj6g0010863 Lotus japonicus
Lsat_1_v5_gn_6_116841 Lactuca sativa
Manes.03G202800 Manihot esculenta
Manes.15G005400 Manihot esculenta
Mapoly0020s0069 Marchantia polymorpha
Mapoly0028s0097 Marchantia polymorpha
Mapoly0087s0071 Marchantia polymorpha
Mapoly0122s0031 Marchantia polymorpha
MCO01G087 Micromonas commoda
MD13G1156200 Malus domestica
MD16G1157100 Malus domestica
Medtr2g034520 Medicago truncatula
Migut.N00047 Erythranthe guttata
MSTRG.21775 Avicennia marina
Nitab4.5_0000647g0090 Nicotiana tabacum
Nitab4.5_0006365g0010 Nicotiana tabacum
Nn4g25611 Nelumbo nucifera
Oeu016485.1 Olea europaea
Os03g0102200 Oryza sativa ssp. japonica
Os07g0615800 Oryza sativa ssp. japonica
Os11g0676650 Oryza sativa ssp. japonica
Os12g0560400 Oryza sativa ssp. japonica
Peaxi162Scf00164g01133 Petunia axillaris
PGR004G2507 Punica granatum
PGSC0003DMG400027213 Solanum tuberosum
Phvul.003G112600 Phaseolus vulgaris
Phvul.009G256100 Phaseolus vulgaris
Potri.008G106900 Populus trichocarpa
Potri.010G142500 Populus trichocarpa
Pp3c18_17910 Physcomitrium patens
PRCOL_00000204 Prasinoderma coloniale
Prupe.1G122000 Prunus persica
Psat6g078760 Pisum sativum
PSO210G6722 Papaver somniferum
PSO761G0124 Papaver somniferum
QL06p011635 Quercus lobata
RcHm_v2.0_Chr4g0424591 Rosa chinensis
Rhsim02G0004900 Rhododendron simsii
Rhsim02G0005000 Rhododendron simsii
Sabra08G0080800 Salix brachista
Sabra10G0110300 Salix brachista
Sabra10G0110500 Salix brachista
SalBow2G2782 Salvia bowleyana
Sc05g0009630 Simmondsia chinensis
Sed0001961 Sechium edule
Sed0006030 Sechium edule
SEGI_37796 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32662 Striga asiatica
SHI00177 Sapria himalayana
SMO174G0170 Selaginella moellendorffii
SMO304G0059 Selaginella moellendorffii
SMO364G0316 Selaginella moellendorffii
Solyc05g053430.3 Solanum lycopersicum
Sopen05g031930 Solanum pennellii
Sp7g14780 Schrenkiella parvula
SpUn0413_0020 Schrenkiella parvula
TAR365G0998 Trochodendron aralioides
THA.LOC104820300 Tarenaya hassleriana
Thecc.04G297700 Theobroma cacao
Thhalv10021989m.g Eutrema salsugineum
Thhalv10026603m.g Eutrema salsugineum
TPR.G10905 Trifolium pratense
TPR.G5757 Trifolium pratense
TWI09G0163 Tripterygium wilfordii
TWI53G0542 Tripterygium wilfordii
TWI53G1753 Tripterygium wilfordii
TWI73G0828 Tripterygium wilfordii
unitig_22.g6354 Utricularia gibba
vmacro15189 Vaccinium macrocarpon
VMungo1215G2752 Vigna mungo
VMungo1309G0143 Vigna mungo
Zm00001eb086380 Zea mays
Zm00001eb088460 Zea mays
Zm00001eb137030 Zea mays
Zm00001eb138580 Zea mays
Zm00001eb230190 Zea mays
Zm00001eb270680 Zea mays
Zm00001eb270690 Zea mays
Zm00001eb327460 Zea mays

User provided reference genes

Program Settings