Gene: ATR0665G356

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0665G356
  • Transcript Identifier ATR0665G356.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00002 : 7005777-7006724 : positive

Gene Family Information

  • ID HOM05D004365
  • #Genes/#Species 164/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00002.398.v1.0
  • pacid 31562440

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0080188
ISO
PLAZA Integrative Orthologygene silencing by RNA-directed DNA methylation AT4G16265
GO:0006379
ISO
PLAZA Homology (enrichment)mRNA cleavage HOM05D004365

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
ISO
PLAZA Homology (enrichment)nucleic acid binding HOM05D004365
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D004365
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G16980

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000419
ISO
PLAZA Integrative OrthologyRNA polymerase V complex AT4G16265
GO:0000418
ISO
PLAZA Integrative OrthologyRNA polymerase IV complex AT4G16265
GO:0005665
ISO
PLAZA Integrative OrthologyRNA polymerase II, core complex AT4G16265

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001529 DNA-directed RNA polymerase, M/15kDa subunit
IPR012164 DNA-directed RNA polymerase subunit/transcription factor S
Mapman id Description
15.1.6.7 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 9