Gene: Lj4g0028172
General Information
Structural Information
- Species Lotus japonicus
- Gene Identifier Lj4g0028172
- Transcript Identifier Lj4g0028172.1
- Gene Type Coding gene
- Location chr4 : 12070657-12073434 : positive
Gene Family Information
- ID HOM05D004365
- #Genes/#Species 164/93
- Phylogenetic origin
- ID ORTHO05D005123
- #Genes/#Species 164/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Lj4g0028172.Lj1.0v1
- pacid 44938369
Descriptions
- Description K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
| GO:0080188 | ISO | PLAZA Integrative Orthology | gene silencing by RNA-directed DNA methylation | AT4G16265 |
| GO:0006379 | ISO | PLAZA Homology (enrichment) | mRNA cleavage | HOM05D004365 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G16980 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000419 | ISO | PLAZA Integrative Orthology | RNA polymerase V complex | AT4G16265 |
| GO:0000418 | ISO | PLAZA Integrative Orthology | RNA polymerase IV complex | AT4G16265 |
| GO:0005665 | ISO | PLAZA Integrative Orthology | RNA polymerase II, core complex | AT4G16265 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.1.6.7 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 9 |