Gene: Carub.0007s2525

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0007s2525
  • Transcript Identifier Carub.0007s2525.1
  • Gene Type Coding gene
  • Location scaffold_7 : 9595011-9596475 : positive

Gene Family Information

  • ID HOM05D004365
  • #Genes/#Species 164/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0007s2525.v1.1
  • pacid 39235740
  • synonym Carubv10006057m.g

Descriptions

  • Description K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006379
IEA
InterPromRNA cleavage
GO:0080188
ISO
PLAZA Integrative Orthologygene silencing by RNA-directed DNA methylation AT4G16265

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000419
ISO
PLAZA Integrative OrthologyRNA polymerase V complex AT4G16265
GO:0000418
ISO
PLAZA Integrative OrthologyRNA polymerase IV complex AT4G16265
GO:0005665
ISO
PLAZA Integrative OrthologyRNA polymerase II, core complex AT4G16265

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001222 Zinc finger, TFIIS-type
IPR034012 Pol II subunit B9, C-terminal zinc ribbon
IPR012164 DNA-directed RNA polymerase subunit/transcription factor S
IPR001529 DNA-directed RNA polymerase, M/15kDa subunit
Mapman id Description
15.1.6.7 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 9